RGG: A general GUI Framework for R scripts. - Ilhami Visne; Erkan Dilaveroglu; Klemens Vierlinger; Martin Lauss; Ahmet Yildiz; Andreas Weinhäusel; Christa Noehammer; Friedrich Leisch; Albert Kriegner (BMC Bioinform., 2009)

ClinQC: a tool for quality control and cleaning of Sanger and NGS data in clinical research. - Ram Vinay Pandey; Stephan Pabinger; Albert Kriegner; Andreas Weinhäusel (BMC Bioinform., 2016)

The Immunome of Colon Cancer: Functional In Silico Analysis of Antigenic Proteins Deduced from IgG Microarray Profiling. - Johana A. Luna Coronell; Khulan Sergelen; Philipp Hofer; István Gyurján; Stefanie Brezina; Peter Hettegger; Gernot Leeb; Karl Mach; Andrea Gsur; Andreas Weinhäusel (Genom. Proteom. Bioinform., 2018)

EPIC-TABSAT: analysis tool for targeted bisulfite sequencing experiments and array-based methylation studies. - Julie Krainer; Andreas Weinhäusel; Karel Hanak; Walter Pulverer; Seza Özen; Klemens Vierlinger; Stephan Pabinger (Nucleic Acids Res., 2019)

Random rotation for identifying differentially expressed genes with linear models following batch effect correction. - Peter Hettegger; Klemens Vierlinger; Andreas Weinhäusel (Bioinform., 2021)