SalmonDB: a bioinformatics resource for Salmo salar and Oncorhynchus mykiss. - Alex Di Génova; Andrés Aravena; Luis Zapata; Mauricio Gonzalez; Alejandro Maass; Patricia Iturra (Database J. Biol. Databases Curation, 2011)

Modeling Parsimonious Putative Regulatory Networks: Complexity and Heuristic Approach. - Vicente Acuña; Andrés Aravena; Alejandro Maass; Anne Siegel (VMCAI, 2014)

Deciphering transcriptional regulations coordinating the response to environmental changes. - Vicente Acuña; Andrés Aravena; Carito Guziolowski; Damien Eveillard; Anne Siegel; Alejandro Maass (BMC Bioinform., 2016)