Amp: A modular approach to machine learning in atomistic simulations. - Alireza Khorshidi; Andrew A. Peterson (Comput. Phys. Commun., 2016)

Population Susceptibility Variation and Its Effect on Contagion Dynamics. - Christopher Rose; Andrew J. Medford; C. Franklin Goldsmith; Tejs Vegge; Joshua Weitz; Andrew A. Peterson (CoRR, 2020)

AmpTorch: A Python package for scalable fingerprint-based neural network training on multi-element systems with integrated uncertainty quantification. - Muhammed Shuaibi; Yuge Hu; Xiangyun Lei; Benjamin M. Comer; Matt Adams; Jacob Paras; Rui Qi Chen; Eric Musa; Joseph Musielewicz; Andrew A. Peterson; Andrew J. Medford; Zachary W. Ulissi (J. Open Source Softw., 2023)

Influence of Coverage Dependence on the Thermophysical Properties of Adsorbates and Its Impact on Microkinetic Models. - Jongyoon Bae; Bjarne Kreitz; Andrew A. Peterson; C. Franklin Goldsmith (J. Chem. Inf. Model., 2025)