Extinction, coexistence, and localized patterns of a bacterial population with contact-dependent inhibition. - Andrew E. Blanchard; Venhar Celik; Ting Lu (BMC Syst. Biol., 2014)

Bacterial social interactions drive the emergence of differential spatial colony structures. - Andrew E. Blanchard; Ting Lu (BMC Syst. Biol., 2015)

Using GANs with adaptive training data to search for new molecules. - Andrew E. Blanchard; Christopher B. Stanley; Debsindhu Bhowmik (J. Cheminformatics, 2021)

Repulsive expansion dynamics in colony growth and gene expression. - Yangxiaolu Cao; John Neu; Andrew E. Blanchard; Ting Lu; Lingchong You (PLoS Comput. Biol., 2021)

Computational Workflow for Accelerated Molecular Design Using Quantum Chemical Simulations and Deep Learning Models. - Andrew E. Blanchard; Pei Zhang; Debsindhu Bhowmik; Kshitij Mehta; John Gounley; Samuel Temple Reeve; Stephan Irle; Massimiliano Lupo Pasini (SMC, 2022)

Language models for the prediction of SARS-CoV-2 inhibitors. - Andrew E. Blanchard; John Gounley; Debsindhu Bhowmik; Mayanka Chandra Shekar; Isaac Lyngaas; Shang Gao 008; Junqi Yin; Aristeidis Tsaris; Feiyi Wang; Jens Glaser (Int. J. High Perform. Comput. Appl., 2022)

Scalable training of graph convolutional neural networks for fast and accurate predictions of HOMO-LUMO gap in molecules. - Jong Youl Choi; Pei Zhang; Kshitij Mehta; Andrew E. Blanchard; Massimiliano Lupo Pasini (J. Cheminformatics, 2022)

Automating Genetic Algorithm Mutations for Molecules Using a Masked Language Model. - Andrew E. Blanchard; Mayanka Chandra Shekar; Shang Gao 008; John Gounley; Isaac Lyngaas; Jens Glaser; Debsindhu Bhowmik (IEEE Trans. Evol. Comput., 2022)

A Keyword-Enhanced Approach to Handle Class Imbalance in Clinical Text Classification. - Andrew E. Blanchard; Shang Gao 008; Hong-Jun Yoon; James Blair Christian; Eric B. Durbin; Xiao-Cheng Wu; Antoinette Stroup; Jennifer A. Doherty; Stephen M. Schwartz; Charles Wiggins; Linda Coyle; Lynne Penberthy; et al. (IEEE J. Biomed. Health Informatics, 2022)

Adaptive language model training for molecular design. - Andrew E. Blanchard; Debsindhu Bhowmik; Zachary R. Fox; John Gounley; Jens Glaser; Belinda S. Akpa; Stephan Irle (J. Cheminformatics, 2023)

Development of message passing-based graph convolutional networks for classifying cancer pathology reports. - Hong-Jun Yoon; Hilda B. Klasky; Andrew E. Blanchard; James Blair Christian; Eric B. Durbin; Xiao-Cheng Wu; Antoinette Stroup; Jennifer A. Doherty; Linda Coyle; Lynne Penberthy; Georgia D. Tourassi (BMC Medical Informatics Decis. Mak., 2024)