Comparing the performance of clusters, Hadoop, and Active Disks on microarray correlation computations. - Jeffrey A. Delmerico; Nathanial A. Byrnes; Andrew E. Bruno; Matthew D. Jones; Steven M. Gallo; Vipin Chaudhary (HiPC, 2009)

iGenomicViewer: R package for visualisation of high dimension genomic data. - Daniel P. Gaile; Lori A. Shepherd; Andrew E. Bruno; Song Liu; Carl D. Morrison; Lara E. Sucheston; Jeffrey C. Miecznikowski (Int. J. Bioinform. Res. Appl., 2010)

Performance metrics and auditing framework for high performance computer systems. - Thomas R. Furlani; Matthew D. Jones; Steven M. Gallo; Andrew E. Bruno; Charng-Da Lu; Amin Ghadersohi; Ryan J. Gentner; Abani K. Patra; Robert L. DeLeon; Gregor von Laszewski; Lizhe Wang 001; Ann Zimmerman (TG, 2011)

Implementing green technologies and practices in a high performance computing center. - Jay U. Patel; Salvatore J. Guercio; Andrew E. Bruno; Matthew D. Jones; Thomas R. Furlani (IGCC, 2013)

Comparing Imputation Procedures for Affymetrix Gene Expression Datasets Using MAQC Datasets. - Sreevidya Sadananda Sadasiva Rao; Lori A. Shepherd; Andrew E. Bruno; Song Liu; Jeffrey C. Miecznikowski (Adv. Bioinformatics, 2013)

FUSIM: a software tool for simulating fusion transcripts. - Andrew E. Bruno; Jeffrey C. Miecznikowski; Maochun Qin; Jianmin Wang 014; Song Liu (BMC Bioinform., 2013)

Performance metrics and auditing framework using application kernels for high-performance computer systems. - Thomas R. Furlani; Matthew D. Jones; Steven M. Gallo; Andrew E. Bruno; Charng-Da Lu; Amin Ghadersohi; Ryan J. Gentner; Abani K. Patra; Robert L. DeLeon; Gregor von Laszewski; Fugang Wang; Ann Zimmerman (Concurr. Comput. Pract. Exp., 2013)

Comprehensive, open-source resource usage measurement and analysis for HPC systems. - James C. Browne; Robert L. DeLeon; Abani K. Patra; William L. Barth; John L. Hammond; Matthew D. Jones; Thomas R. Furlani; Barry I. Schneider; Steven M. Gallo; Amin Ghadersohi; Ryan J. Gentner; Jeffrey T. Palmer; et al. (Concurr. Comput. Pract. Exp., 2014)

Classification of crystallization outcomes using deep convolutional neural networks. - Andrew E. Bruno; Patrick Charbonneau; Janet Newman; Edward H. Snell; David R. So; Vincent Vanhoucke; Shawn Williams; Julie Wilson (CoRR, 2018)

Towards Performant Workflows, Monitoring and Measuring. - Jeanette M. Sperhac; Robert L. DeLeon; Joseph P. White; Matthew D. Jones; Andrew E. Bruno; Renette L. Jones-Ivey; Thomas R. Furlani; Jonathan E. Bard; Vipin Chaudhary (ICCCN, 2020)

Grendel: Bare Metal Provisioning System for High Performance Computing. - Andrew E. Bruno; Salvatore J. Guercio; Doris Sajdak; Tony Kew; Matthew D. Jones (PEARC, 2020)

Open OnDemand, XDMoD, and ColdFront: an HPC center management toolset. - Dori Sajdak; Andrew E. Bruno; Ben Plessinger; Eric Franz (PEARC Companion, 2020)

ColdFront: Resource Allocation Management System. - Andrew E. Bruno; Doris Sajdak (PEARC, 2021)