Multi-tiered distributed computing platform. - Andrew J. Page; Thomas M. Keane; Richard Allen; Thomas J. Naughton; John Waldron (PPPJ, 2003)

Adaptive Scheduling across a Distributed Computation Platform. - Andrew J. Page; Thomas M. Keane; Thomas J. Naughton (ISPDC/HeteroPar, 2004)

A High-Throughput Bioinformatics Distributed Computing Platform. - Thomas M. Keane; Andrew J. Page; James O. McInerney; Thomas J. Naughton (CBMS, 2005)

Bioinformatics on a Heterogeneous Java Distributed System. - Andrew J. Page; Thomas M. Keane; Thomas J. Naughton (IPDPS, 2005)

Dynamic Task Scheduling using Genetic Algorithms for Heterogeneous Distributed Computing. - Andrew J. Page; Thomas J. Naughton (IPDPS, 2005)

Framework for Task Scheduling in Heterogeneous Distributed Computing Using Genetic Algorithms. - Andrew J. Page; Thomas J. Naughton (Artif. Intell. Rev., 2005)

Distributed Monte Carlo simulation of light transportation in tissue. - Andrew J. Page; Shirley Coyle; Thomas M. Keane; Thomas J. Naughton; Charles Markham; Tomás E. Ward (IPDPS, 2006)

Building Large Phylogenetic Trees on Coarse-Grained Parallel Machines. - Thomas M. Keane; Andrew J. Page; Thomas J. Naughton; Simon A. A. Travers; James O. McInerney (Algorithmica, 2006)

Scheduling in a dynamic heterogeneous distributed system using estimation error. - Andrew J. Page; Thomas M. Keane; Thomas J. Naughton (J. Parallel Distributed Comput., 2008)

Multi-heuristic dynamic task allocation using genetic algorithms in a heterogeneous distributed system. - Andrew J. Page; Thomas M. Keane; Thomas J. Naughton (J. Parallel Distributed Comput., 2010)

Roary: rapid large-scale prokaryote pan genome analysis. - Andrew J. Page; Carla A. Cummins; Martin Hunt; Vanessa K. Wong; Sandra Reuter; Matthew T. G. Holden; Maria Fookes; Daniel Falush; Jacqueline A. Keane; Julian Parkhill (Bioinform., 2015)

The TraDIS toolkit: sequencing and analysis for dense transposon mutant libraries. - Lars Barquist; Matthew Mayho; Carla A. Cummins; Amy K. Cain; Christine J. Boinett; Andrew J. Page; Gemma C. Langridge; Michael A. Quail; Jacqueline A. Keane; Julian Parkhill (Bioinform., 2016)

GFF3toEMBL: Preparing annotated assemblies for submission to EMBL. - Andrew J. Page; Sascha Steinbiss; Ben Taylor; Torsten Seemann; Jacqueline A. Keane (J. Open Source Softw., 2016)

Multilocus sequence typing by blast from de novo assemblies against PubMLST. - Andrew J. Page; Ben Taylor; Jacqueline A. Keane (J. Open Source Softw., 2016)

SaffronTree: Fast, reference-free pseudo-phylogenomic trees from reads or contigs. - Andrew J. Page; Martin Hunt; Torsten Seemann; Jacqueline A. Keane (J. Open Source Softw., 2017)

TipToft: detecting plasmids contained in uncorrected long read sequencing data. - Andrew J. Page; Torsten Seemann (J. Open Source Softw., 2019)

AlbaTraDIS: Comparative analysis of large datasets from parallel transposon mutagenesis experiments. - Andrew J. Page; Sarah Bastkowski; Muhammad Yasir; A. Keith Turner; Thanh Le Viet; George M. Savva; Mark A. Webber; Ian G. Charles (PLoS Comput. Biol., 2020)