Gramene 2013: comparative plant genomics resources. - Marcela K. Monaco; Joshua C. Stein; Sushma Naithani; Sharon Wei; Palitha Dharmawardhana; Sunita Kumari; Vindhya Amarasinghe; Ken Youens-Clark; James Thomason; Justin Preece; Shiran Pasternak; Andrew Olson; et al. (Nucleic Acids Res., 2014)

Gramene 2016: comparative plant genomics and pathway resources. - Marcela K. Tello-Ruiz; Joshua C. Stein; Sharon Wei; Justin Preece; Andrew Olson; Sushma Naithani; Vindhya Amarasinghe; Palitha Dharmawardhana; Yinping Jiao; Joseph Mulvaney; Sunita Kumari; Kapeel Chougule; et al. (Nucleic Acids Res., 2016)

Improved maize reference genome with single-molecule technologies. - Yinping Jiao; Paul Peluso; Jinghua Shi; Tiffany Y. Liang; Michelle C. Stitzer; Bo Wang 117; Michael Campbell; Joshua C. Stein; Xuehong Wei; Chen-Shan Chin; Katherine E. Guill; Michael Regulski; et al. (Nat., 2017)

NovoGraph: Genome graph construction from multiple long-read de novo assemblies. - Evan Biederstedt; Jeffrey C. Oliver; Nancy F. Hansen; Aarti Jajoo; Nathan A. Dunn; Andrew Olson; Ben Busby; Alexander T. Dilthey (F1000Research, 2018)

Ensembl Genomes 2018: an integrated omics infrastructure for non-vertebrate species. - Paul Julian Kersey; James E. Allen; Alexis Allot; Matthieu Barba; Sanjay Boddu; Bruce J. Bolt; Denise Carvalho-Silva; Mikkel B. Christensen; Paul Davis 001; Christoph Grabmueller; Navin Kumar; Zicheng Liu 004; et al. (Nucleic Acids Res., 2018)

Gramene 2018: unifying comparative genomics and pathway resources for plant research. - Marcela K. Tello-Ruiz; Sushma Naithani; Joshua C. Stein; Parul Gupta; Michael Campbell; Andrew Olson; Sharon Wei; Justin Preece; Matthew J. Geniza; Yinping Jiao; Young Koung Lee; Bo Wang 117; et al. (Nucleic Acids Res., 2018)

Ensembl Genomes 2020 - enabling non-vertebrate genomic research. - Kevin L. Howe; Bruno Contreras-Moreira; Nishadi De Silva; Gareth Maslen; Wasiu A. Akanni; James E. Allen; Jorge Álvarez-Jarreta; Matthieu Barba; Dan M. Bolser; Lahcen Cambell; Manuel Carbajo; Marc Chakiachvili; et al. (Nucleic Acids Res., 2020)

Plant Reactome: a knowledgebase and resource for comparative pathway analysis. - Sushma Naithani; Parul Gupta; Justin Preece; Peter D'Eustachio; Justin Elser; Priyanka Garg; Daemon A. Dikeman; Jason Kiff; Justin Cook; Andrew Olson; Sharon Wei; Marcela K. Tello-Ruiz; et al. (Nucleic Acids Res., 2020)

Adapting EHRs to Support Ongoing Provider Diagnostic Calibration. - Julia Adler-Milstein; Andrew Olson; Charlene R. Weir; Benjamin I. Rosner; Robert E. El-Kareh (AMIA, 2021)

Ranked choice voting for representative transcripts with TRaCE. - Andrew Olson; Doreen Ware (Bioinform., 2021)

Gramene 2021: harnessing the power of comparative genomics and pathways for plant research. - Marcela K. Tello-Ruiz; Sushma Naithani; Parul Gupta; Andrew Olson; Sharon Wei; Justin Preece; Yinping Jiao; Bo Wang 117; Kapeel Chougule; Priyanka Garg; Justin Elser; Sunita Kumari; et al. (Nucleic Acids Res., 2021)

Ensembl Genomes 2022: an expanding genome resource for non-vertebrates. - Andrew D. Yates; James E. Allen; M. Ridwan Amode; Andrey G. Azov; Matthieu Barba; Andrés Becerra; Jyothish Bhai; Lahcen I. Campbell; Manuel Carbajo Martinez; Marc Chakiachvili; Kapeel Chougule; Mikkel B. Christensen; et al. (Nucleic Acids Res., 2022)

Building Sentiment Analysis Pipeline: A Case Study on Amazon Reviews. - Hynek Boril; Kyle King; Grant Strenski; Andrew Olson; William Husen (ICIS, 2024)

Superhuman performance of a large language model on the reasoning tasks of a physician. - Peter G. Brodeur; Thomas A. Buckley; Zahir Kanjee; Ethan Goh; Evelyn Bin Ling; Priyank Jain; Stephanie Cabral; Raja-Elie Abdulnour; Adrian Haimovich; Jason A. Freed; Andrew Olson; Daniel J. Morgan; et al. (CoRR, 2024)

GrameneOryza: a comprehensive resource for Oryza genomes, genetic variation, and functional data. - Sharon Wei; Kapeel Chougule; Andrew Olson; Zhenyuan Lu; Marcela K. Tello-Ruiz; Vivek Kumar; Sunita Kumari; Lifang Zhang; Audra Olson; Catherine Kim; Nick Gladman; Doreen Ware (Database J. Biol. Databases Curation, 2025)