Goldsurfer2 (Gs2): A comprehensive tool for the analysis and visualization of genome wide association studies. - Fredrik Pettersson; Andrew P. Morris; Michael R. Barnes; Lon R. Cardon (BMC Bioinform., 2008)

CCRaVAT and QuTie - enabling analysis of rare variants in large-scale case control and quantitative trait association studies. - Robert Lawrence; Aaron G. Day-Williams; Katherine S. Elliott; Andrew P. Morris; Eleftheria Zeggini (BMC Bioinform., 2010)

GWAMA: software for genome-wide association meta-analysis. - Reedik Mägi; Andrew P. Morris (BMC Bioinform., 2010)

SurvivalGWAS_Power: a user friendly tool for power calculations in pharmacogenetic studies with "time to event" outcomes. - Hamzah Syed; Andrea L. Jorgensen; Andrew P. Morris (BMC Bioinform., 2016)

MARV: a tool for genome-wide multi-phenotype analysis of rare variants. - Marika Kaakinen; Reedik Mägi; Krista Fischer; Jani Heikkinen; Marjo-Riitta Järvelin; Andrew P. Morris; Inga Prokopenko (BMC Bioinform., 2017)

SCOPA and META-SCOPA: software for the analysis and aggregation of genome-wide association studies of multiple correlated phenotypes. - Reedik Mägi; Yury V. Suleimanov; Geraldine M. Clarke; Marika Kaakinen; Krista Fischer; Inga Prokopenko; Andrew P. Morris (BMC Bioinform., 2017)

SurvivalGWAS_SV: software for the analysis of genome-wide association studies of imputed genotypes with "time-to-event" outcomes. - Hamzah Syed; Andrea L. Jorgensen; Andrew P. Morris (BMC Bioinform., 2017)

The use of class imbalanced learning methods on ULSAM data to predict the case-control status in genome-wide association studies. - R. Onur Öztornaci; Hamzah Syed; Andrew P. Morris; Bahar Tasdelen (J. Big Data, 2023)