A Graph Community Approach for Constructing microRNA Networks. - Benika Hall; Andrew Quitadamo; Xinghua Shi (BigCom, 2015)

An integrated network of microRNA and gene expression in ovarian cancer. - Andrew Quitadamo; Lu Tian; Benika Hall; Xinghua Shi (BMC Bioinform., 2015)

A predictive model of gene expression using a deep learning framework. - Rui Xie; Andrew Quitadamo; Jianlin Cheng; Xinghua Shi (BIBM, 2016)

Bayesian Hyperparameter Optimization for Machine Learning Based eQTL Analysis. - Andrew Quitadamo; James Johnson; Xinghua Shi (BCB, 2017)