Enabling Atlas2 personal genome analysis on the cloud. - Uday S. Evani; Danny Challis; Jin Yu 003; Andrew R. Jackson; Sameer Paithankar; Matthew N. Bainbridge; Cristian Coarfa; Aleksandar Milosavljevic; Fuli Yu (GENSiPS, 2011)

An integrative variant analysis suite for whole exome next-generation sequencing data. - Danny Challis; Jin Yu 003; Uday S. Evani; Andrew R. Jackson; Sameer Paithankar; Cristian Coarfa; Aleksandar Milosavljevic; Richard A. Gibbs; Fuli Yu (BMC Bioinform., 2012)

The Genboree Microbiome Toolset and the analysis of 16S rRNA microbial sequences. - Kevin Riehle; Cristian Coarfa; Andrew R. Jackson; Jun Ma; Arpit Tandon; Sameer Paithankar; Sriram Raghuraman; Toni-Ann Mistretta; Delphine Saulnier; Sabeen Raza; Maria Diaz; Robert Shulman; et al. (BMC Bioinform., 2012)

Analysis of interactions between the epigenome and structural mutability of the genome using Genboree workbench tools. - Cristian Coarfa; Christina Pichot; Andrew R. Jackson; Arpit Tandon; Viren Amin; Sriram Raghuraman; Sameer Paithankar; Adrian V. Lee; Sean E. McGuire; Aleksandar Milosavljevic (BMC Bioinform., 2014)