XRate: a fast prototyping, training and annotation tool for phylo-grammars. - Peter S. Klosterman; Andrew V. Uzilov; Yuri R. Bendaña; Robert K. Bradley; Sharon Chao; Carolin Kosiol; Nick Goldman; Ian H. Holmes (BMC Bioinform., 2006)

Detection of non-coding RNAs on the basis of predicted secondary structure formation free energy change. - Andrew V. Uzilov; Joshua M. Keegan; David H. Mathews (BMC Bioinform., 2006)

Integrating 400 million variants from 80, 000 human samples with extensive annotations: towards a knowledge base to analyze disease cohorts. - Jörg Hakenberg; Wei-Yi Cheng; Philippe Thomas 002; Ying-Chih Wang; Andrew V. Uzilov; Rong Chen 006 (BMC Bioinform., 2016)