Merging two gene-expression studies via cross-platform normalization. - Andrey A. Shabalin; Håkon Tjelmeland; Cheng Fan 006; Charles M. Perou; Andrew B. Nobel (Bioinform., 2008)

FastMap: Fast eQTL mapping in homozygous populations. - Daniel M. Gatti; Andrey A. Shabalin; Tieu-Chong Lam; Fred A. Wright; Ivan Rusyn; Andrew B. Nobel (Bioinform., 2009)

Detection of Low Rank Signals in Noise and Fast Correlation Mining with Applications to Large Biological Data. - Andrey A. Shabalin (2010)

Matrix eQTL: ultra fast eQTL analysis via large matrix operations. - Andrey A. Shabalin (Bioinform., 2012)

seeQTL: a searchable database for human eQTLs. - Kai Xia; Andrey A. Shabalin; Shunping Huang; Vered Madar; Yi-Hui Zhou; Wei Wang 010; Fei Zou; Wei Sun 006; Patrick F. Sullivan; Fred A. Wright (Bioinform., 2012)

Reconstruction of a low-rank matrix in the presence of Gaussian noise. - Andrey A. Shabalin; Andrew B. Nobel (J. Multivar. Anal., 2013)

RaMWAS: fast methylome-wide association study pipeline for enrichment platforms. - Andrey A. Shabalin; Mohammad W. Hattab; Shaunna L. Clark; Robin F. Chan; Gaurav Kumar; Karolina A. Åberg; Edwin J. C. G. van den Oord (Bioinform., 2018)