Probability Profiles - Novel Approach in Tandem Mass Spectrometry De Novo Sequencing. - Tema Fridman; Robert M. Day; Jane Razumovsbya; Dong Xu; Andrey Gorin (CSB, 2003)

Inference of Protein-Protein Interactions by Unlikely Profile Pair. - Byung-Hoon Park; George Ostrouchov; Gong-Xin Yu; Al Geist; Andrey Gorin; Nagiza F. Samatova (ICDM, 2003)

PPM-Chain De novo Peptide Identification Program Comparable in Performance to Sequest. - Robert M. Day; Andrey Borziak; Andrey Gorin (CSB, 2004)

Probability Profile Method - New Approach to Data Analysis in Tandem Mass Spectrometry. - Andrey Gorin; Robert M. Day; Andrey Borziak; Michael B. Strader; Gregory B. Hurst; Tema Fridman (CSB, 2004)

Parallel tempering in Rosetta Practice. - Yaohang Li; Charlie E. M. Strauss; Andrey Gorin (Advances in Bioinformatics and Its Applications, 2005)

Generating theoretical spectra for peptide identification. - Tema Fridman; Vladimir Protopopescu; Gregory B. Hurst; Andrey Borziak; Andrey Gorin (METMBS, 2005)

Decentralized Replica Exchange Parallel Tempering: An Efficient Implementation of Parallel Tempering Using MPI and SPRNG. - Yaohang Li; Michael Mascagni; Andrey Gorin (ICCSA (3), 2007)

Invited Keynote Talk: Computing P-Values for Peptide Identifications in Mass Spectrometry. - Nikita Arnold; Tema Fridman; Robert M. Day; Andrey Gorin (ISBRA, 2008)

Hybrid parallel tempering and simulated annealing method. - Yaohang Li; Vladimir A. Protopopescu; Nikita Arnold; Xinyu Zhang; Andrey Gorin (Appl. Math. Comput., 2009)

A decentralized parallel implementation for parallel tempering algorithm. - Yaohang Li; Michael Mascagni; Andrey Gorin (Parallel Comput., 2009)

Assessment of genome annotation using gene function similarity within the gene neighborhood. - Se-Ran Jun; Intawat Nookaew; Loren J. Hauser; Andrey Gorin (BMC Bioinform., 2017)

Intelligent Diagnostic System for the Sliding Bearing Unit. - Alexey Rodichev; Andrey Gorin; Kirill Nastepanin; Roman Polyakov (ISDA (4), 2022)