Unsupervised statistical clustering of environmental shotgun sequences. - Andrey Kislyuk; Srijak Bhatnagar; Jonathan Dushoff; Joshua S. Weitz (BMC Bioinform., 2009)

Frameshift detection in prokaryotic genomic sequences. - Andrey Kislyuk; Alexandre Lomsadze; Alla L. Lapidus; Mark Borodovsky (Int. J. Bioinform. Res. Appl., 2009)

Meningococcus genome informatics platform: a system for analyzing multilocus sequence typing data. - Lee S. Katz; Chris R. Bolen; Brian H. Harcourt; Susanna Schmink; Xin Wang; Andrey Kislyuk; Robert T. Taylor; Leonard W. Mayer; I. King Jordan (Nucleic Acids Res., 2009)

A computational genomics pipeline for prokaryotic sequencing projects. - Andrey Kislyuk; Lee S. Katz; Sonia Agrawal; Matthew S. Hagen; Andrew B. Conley; Pushkala Jayaraman; Viswateja Nelakuditi; Jay C. Humphrey; Scott A. Sammons; Dhwani Govil; Raydel D. Mair; Kathleen M. Tatti; et al. (Bioinform., 2010)

Algorithm development for next generation sequencing-based metagenome analysis. - Andrey Kislyuk (2010)

Neisseria Base: a comparative genomics database for Neisseria meningitidis. - Lee S. Katz; Jay C. Humphrey; Andrew B. Conley; Viswateja Nelakuditi; Andrey Kislyuk; Sonia Agrawal; Pushkala Jayaraman; Brian H. Harcourt; Melissa A. Olsen-Rasmussen; Michael Frace; Nitya V. Sharma; Leonard W. Mayer; et al. (Database J. Biol. Databases Curation, 2011)