A relational schema for both array-based and SAGE gene expression experiments. - Christian J. Stoeckert Jr.; Angel D. Pizarro; Elisabetta Manduchi; M. Gibson; Brian P. Brunk; Jonathan Crabtree; Jonathan Schug; Shai Shen-Orr; G. Christian Overton (Bioinform., 2001)

An object model and database for functional genomics. - Andrew R. Jones; Ela Hunt; Jonathan M. Wastling; Angel D. Pizarro; Christian J. Stoeckert Jr. (Bioinform., 2004)

RAD and the RAD Study-Annotator: an approach to collection, organization and exchange of all relevant information for high-throughput gene expression studies. - Elisabetta Manduchi; Gregory R. Grant; H. He; Junmin Liu; Matthew D. Mailman; Angel D. Pizarro; Patricia L. Whetzel; Christian J. Stoeckert Jr. (Bioinform., 2004)

The Gene Wiki: community intelligence applied to human gene annotation. - Jon W. Huss III; Pierre Lindenbaum; Michael Martone; Donabel Roberts; Angel D. Pizarro; Faramarz Valafar; John B. Hogenesch; Andrew I. Su (Nucleic Acids Res., 2010)

Comparative analysis of RNA-Seq alignment algorithms and the RNA-Seq unified mapper (RUM). - Gregory R. Grant; Michael H. Farkas; Angel D. Pizarro; Nicholas F. Lahens; Jonathan Schug; Brian P. Brunk; Christian J. Stoeckert Jr.; John B. Hogenesch; Eric A. Pierce (Bioinform., 2011)

CircaDB: a database of mammalian circadian gene expression profiles. - Angel D. Pizarro; Katharina Hayer; Nicholas F. Lahens; John B. Hogenesch (Nucleic Acids Res., 2013)

Benchmark analysis of algorithms for determining and quantifying full-length mRNA splice forms from RNA-seq data. - Katharina E. Hayer; Angel D. Pizarro; Nicholas F. Lahens; John B. Hogenesch; Gregory R. Grant (Bioinform., 2015)