A Computational Model of Gene Regulatory Networks and its Topological Properties. - Ângela Gonçalves; Ernesto Costa (ALIFE, 2008)

A pipeline for RNA-seq data processing and quality assessment. - Ângela Gonçalves; Andrew Tikhonov; Alvis Brazma; Misha Kapushesky (Bioinform., 2011)

Fast identification of differential distributions in single-cell RNA-sequencing data with waddR. - Roman Schefzik; Julian Flesch; Ângela Gonçalves (Bioinform., 2021)