GANM: A protein-ligand docking approach based on genetic algorithm and normal modes. - Angélica Nakagawa Lima; Eric Allison Philot; David Perahia; Antonio Sérgio Kimus Braz; Luis P. B. Scott (Appl. Math. Comput., 2012)

Predicting regions prone to protein aggregation based on SVM algorithm. - Carlos Alves Moreira; Eric Allison Philot; Angélica Nakagawa Lima; Ana Ligia Scott (Appl. Math. Comput., 2019)

Before and after AlphaFold2: An overview of protein structure prediction. - Letícia M. F. Bertoline; Angélica Nakagawa Lima; José Eduardo Krieger; Samantha K. Teixeira (Frontiers Bioinform., 2023)