Computational complexity of minimum P4 vertex cover problem for regular and K1, 4-free graphs. - N. Safina Devi; Aniket C. Mane; Sounaka Mishra (Discret. Appl. Math., 2015)

A Tractable Variant of the Single Cut or Join Distance with Duplicated Genes. - Pedro Feijão; Aniket C. Mane; Cédric Chauve (RECOMB-CG, 2017)

The Rooted SCJ Median with Single Gene Duplications. - Aniket C. Mane; Manuel Lafond; Pedro Feijão; Cédric Chauve (RECOMB-CG, 2018)

The distance and median problems in the single-cut-or-join model with single-gene duplications. - Aniket C. Mane; Manuel Lafond; Pedro Cipriano Feijão; Cédric Chauve (Algorithms Mol. Biol., 2020)

A Mixed Integer Linear Programming Algorithm for Plasmid Binning. - Aniket C. Mane; Mahsa Faizrahnemoon; Cédric Chauve (RECOMB-CG, 2022)

PlasBin-flow: a flow-based MILP algorithm for plasmid contigs binning. - Aniket C. Mane; Mahsa Faizrahnemoon; Tomás Vinar; Brona Brejová; Cédric Chauve (Bioinform., 2023)

Plaseval: a framework for comparing and evaluating plasmid detection tools. - Aniket C. Mane; Haley Sanderson; Aaron P. White; Rahat Zaheer; Robert Beiko; Cédric Chauve (BMC Bioinform., 2024)