NIFSTD and NeuroLex: Comprehensive Neuroscience Ontology Development Based on Multiple Biomedical Ontologies and Community Involvement. - Fahim T. Imam; Stephen D. Larson; Jeffrey S. Grethe; Amarnath Gupta; Anita E. Bandrowski; Maryann E. Martone (ICBO, 2011)

An Ontology-Based Approach to Linking Model Organisms and Resources to Human Diseases. - Chris Mungall; David Anderson; Anita E. Bandrowski; Brian A. Canada; Andrew Chatr-aryamontri; Keith C. Cheng; P. Michael Conn; Kara Dolinski; Mark H. Ellisman; Janan T. Eppig; Jeffrey S. Grethe; Joseph W. Kemnitz; et al. (ICBO, 2011)

Maturation of Neuroscience Information Framework: An Ontology Driven Information System for Neuroscience. - Fahim T. Imam; Stephen D. Larson; Anita E. Bandrowski; Jeffrey S. Grethe; Amarnath Gupta; Maryann E. Martone (FOIS, 2012)

A hybrid human and machine resource curation pipeline for the Neuroscience Information Framework. - Anita E. Bandrowski; Jonathan Cachat; Yuling Li 005; Hans-Michael Müller; Paul W. Sternberg; Paolo Ciccarese; Tim Clark; Luis N. Marenco; Rixin Wang; Vadim Astakhov; Jeffrey S. Grethe; Maryann E. Martone (Database J. Biol. Databases Curation, 2012)

The UCLA multimodal connectivity database: a web-based platform for brain connectivity matrix sharing and analysis. - Jesse A. Brown; Jeffrey D. Rudie; Anita E. Bandrowski; John D. Van Horn; Susan Y. Bookheimer (Frontiers Neuroinformatics, 2012)

Prototype of Kepler Processing Workflows For Microscopy And Neuroinformatics. - Vadim Astakhov; Anita E. Bandrowski; Amarnath Gupta; A. W. Kulungowski; Jeffrey S. Grethe; James Bouwer; T. Molin; V. Rowley; S. Penticoff; Masako Terada; W. Wong; Hiroyuki Hakozaki; et al. (ICCS, 2012)

Introducing The Neuroscience Gateway. - Subhashini Sivagnanam; Amit Majumdar 001; Kenneth Yoshimoto; Vadim Astakhov; Anita E. Bandrowski; Maryann E. Martone; Nicholas T. Carnevale (IWSG, 2013)

Semantic query reformulation: the NIF experience. - Amarnath Gupta; Anita E. Bandrowski; Christopher Condit; Xufei Qian; Jeffrey S. Grethe; Maryann E. Martone (SSDBM, 2013)

A neuroscience gateway: software and implementation. - Subhashini Sivagnanam; Vadim Astakhov; Kenneth Yoshimoto; Ted Carnevale; Maryann E. Martone; Amitava Majumdar 001; Anita E. Bandrowski (XSEDE, 2013)

OMICtools: an informative directory for multi-omic data analysis. - Vincent J. Henry; Anita E. Bandrowski; Anne-Sophie Pepin; Bruno J. Gonzalez; Arnaud Desfeux (Database J. Biol. Databases Curation, 2014)

Interdisciplinary perspectives on the development, integration, and application of cognitive ontologies. - Janna Hastings; Gwen A. Frishkoff; Barry Smith 001; Mark Jensen; Russell A. Poldrack; Jane Lomax; Anita E. Bandrowski; Fahim T. Imam; Jessica A. Turner; Maryann E. Martone (Frontiers Neuroinformatics, 2014)

Extending the NIF DISCO framework to automate complex workflow: coordinating the harvest and integration of data from diverse neuroscience information resources. - Luis N. Marenco; Rixin Wang; Anita E. Bandrowski; Jeffrey S. Grethe; Gordon M. Shepherd; Perry L. Miller (Frontiers Neuroinformatics, 2014)

Neuroscience Information Framework (NIF). - Maryann E. Martone; Anita E. Bandrowski (Encyclopedia of Computational Neuroscience, 2014)

Early experiences in developing and managing the neuroscience gateway. - Subhashini Sivagnanam; Amit Majumdar 001; Kenneth Yoshimoto; Vadim Astakhov; Anita E. Bandrowski; Maryann E. Martone; Nicholas T. Carnevale (Concurr. Comput. Pract. Exp., 2015)

The Resource Identification Initiative: A Cultural Shift in Publishing. - Anita E. Bandrowski; Matthew H. Brush; Jeffrey S. Grethe; Melissa A. Haendel; David N. Kennedy; Sean L. Hill; Patrick R. Hof; Maryann E. Martone; Maaike Pols; Serena S. Tan; Nicole L. Washington; Elena V. Zudilova-Seinstra; et al. (Neuroinformatics, 2016)

Assessing value of biomedical digital repositories. - Chun-Nan Hsu; Anita E. Bandrowski; Jeffrey S. Grethe; Maryann E. Martone (PeerJ Prepr., 2017)

Research Resource IDentifiers for Key Biological Resources. - Anita E. Bandrowski; Tom Gillespie; Maryann E. Martone (RO, 2018)

How BIDs and BIDs validator has informed the data aggregation needs of the Stimulating Peripheral Activity to Relieve Conditions, SPARC, consortium. - Anita E. Bandrowski; Tom Gillespie; Monique Surles-Zeigler; Gabrielle Pine; Jeffrey S. Grethe; Maryann E. Martone (RO, 2019)

Bio-AnswerFinder: a system to find answers to questions from biomedical texts. - Ibrahim Burak Özyurt; Anita E. Bandrowski; Jeffrey S. Grethe (Database J. Biol. Databases Curation, 2020)

Nine Best Practices for Research Software Registries and Repositories: A Concise Guide. - Alain Monteil; Alejandra N. González-Beltrán; Alexandros Ioannidis; Alice Allen; Allen Lee; Anita E. Bandrowski; Bruce E. Wilson; Bryce D. Mecum; Caifan Du; Carly Robinson; Daniel Garijo; Daniel S. Katz; et al. (CoRR, 2020)

Comparing the Use of Research Resource Identifiers and Natural Language Processing for Citation of Databases, Software, and Other Digital Artifacts. - Chun-Nan Hsu; Anita E. Bandrowski; Tom Gillespie; Jon Udell; Ko-Wei Lin; Ibrahim Burak Özyurt; Jeffrey S. Grethe; Maryann E. Martone (Comput. Sci. Eng., 2020)

Antibody Watch: Text mining antibody specificity from the literature. - Chun-Nan Hsu; Chia-Hui Chang; Thamolwan Poopradubsil; Amanda Lo; Karen A. William; Ko-Wei Lin; Anita E. Bandrowski; Ibrahim Burak Özyurt; Jeffrey S. Grethe; Maryann E. Martone (PLoS Comput. Biol., 2021)

PreprintMatch: a tool for preprint publication detection applied to analyze global inequities in scientific publishing. - Peter Eckmann; Anita E. Bandrowski (CoRR, 2022)

The Antibody Registry: ten years of registering antibodies. - Anita E. Bandrowski; Mason Pairish; Peter Eckmann; Jeffrey S. Grethe; Maryann E. Martone (Nucleic Acids Res., 2023)

Establishing an early indicator for data sharing and reuse. - Agata Piekniewska; Laurel L. Haak; Darla Henderson; Katherine McNeill 001; Anita E. Bandrowski; Yvette Seger (Learn. Publ., 2024)

Automatic detection and extraction of key resources from tables in biomedical papers. - Ibrahim Burak Özyurt; Anita E. Bandrowski (BioData Min., 2025)

Use as Directed? A Comparison of Software Tools Intended to Check Rigor and Transparency of Published Work. - Peter Eckmann; Adrian Barnett; Alexandra Bannach-Brown; Elisa Pilar Bascunan Atria; Guillaume Cabanac; Louise Delwen Owen Franzen; Malgorzata Anna Gazda; Kaitlyn Hair; James Howison; Halil Kilicoglu; Cyril Labbé; Sarah McCann; et al. (CoRR, 2025)