Bayesian gene/species tree reconciliation and orthology analysis using MCMC. - Lars Arvestad; Ann-Charlotte Berglund; Jens Lagergren; Bengt Sennblad (ISMB (Supplement of Bioinformatics), 2003)

Gene tree reconstruction and orthology analysis based on an integrated model for duplications and sequence evolution. - Lars Arvestad; Ann-Charlotte Berglund; Jens Lagergren; Bengt Sennblad (RECOMB, 2004)

Bioinformatics and Computational Biology: Minisymposium Abstract. - Ann-Charlotte Berglund Sonnhammer; Sverker Holmgren (PARA, 2006)

primetv: a viewer for reconciled trees. - Bengt Sennblad; Eva Schreil; Ann-Charlotte Berglund Sonnhammer; Jens Lagergren; Lars Arvestad (BMC Bioinform., 2007)

InParanoid 6: eukaryotic ortholog clusters with inparalogs. - Ann-Charlotte Berglund; Erik Sjölund; Gabriel Östlund; Erik L. L. Sonnhammer (Nucleic Acids Res., 2008)