Methylation plotter: a web tool for dynamic visualization of DNA methylation data. - Izaskun Mallona; Anna Díez-Villanueva; Miguel A. Peinado (Source Code Biol. Medicine, 2014)

regioneR: an R/Bioconductor package for the association analysis of genomic regions based on permutation tests. - Bernat Gel; Anna Díez-Villanueva; Eduard Serra; Marcus Buschbeck; Miguel A. Peinado; Roberto Malinverni (Bioinform., 2016)

Chainy: an universal tool for standardized relative quantification in real-time PCR. - Izaskun Mallona; Anna Díez-Villanueva; Berta Martín; Miguel A. Peinado (Bioinform., 2017)