PRAM Computations Resilient to Memory Faults. - Bogdan S. Chlebus; Anna Gambin; Piotr Indyk (ESA, 1994)

Shared-Memory Simulations on a Faulty-Memory DMM. - Bogdan S. Chlebus; Anna Gambin; Piotr Indyk (ICALP, 1996)

On the Semantics of Multistage Interconnection Networks. - Anna Gambin; Slawomir Lasota 001 (SOFSEM, 1996)

Randomized Meldable Priority Queues. - Anna Gambin; Adam Malinowski (SOFSEM, 1998)

On Approximating the Number of Bases of Exchange Preserving Matroids. - Anna Gambin (MFCS, 1999)

Randomized Gossiping by Packets in Faulty Networks. - Anna Gambin; Adam Malinowski (SOFSEM, 1999)

A New Combinatorial Algorithm for Large Markov Chains (Extended Abstract). - Anna Gambin; Piotr Pokarowski (CASC, 2001)

A Combinatorial Aggregation Algorithm for Stationary Distribution of a Large Markov Chain. - Anna Gambin; Piotr Pokarowski (FCT, 2001)

On Different Models for Packet Flow in Multistage Interconnection Networks. - Martin Dietzfelbinger; Anna Gambin; Slawomir Lasota 001 (Fundam. Informaticae, 2001)

Contextual alignment of biological sequences. - Anna Gambin; Slawomir Lasota 001; Radoslaw Szklarczyk; Jerzy Tiuryn; Jerzy Tyszkiewicz (ECCB, 2002)

Almost FPRAS for Lattice Models of Protein Folding. - Anna Gambin; Damian Wójtowicz (WEA, 2005)

Efficient Model-Based Clustering for LC-MS Data. - Marta Luksza; Boguslaw Kluge; Jerzy Ostrowski; Jakub Karczmarski; Anna Gambin (WABI, 2006)

Applying dynamic Bayesian networks to perturbed gene expression data. - Norbert Dojer; Anna Gambin; Andrzej Mizera; Bartek Wilczynski; Jerzy Tiuryn (BMC Bioinform., 2006)

Analyzing Stationary States of Gene Regulatory Network Using Petri Nets. - Anna Gambin; Slawomir Lasota 001; Michai Rutkowski (Silico Biol., 2006)

Alignment with Context Dependent Scoring Function. - Anna Gambin; Jerzy Tiuryn; Jerzy Tyszkiewicz (J. Comput. Biol., 2006)

No-Regret Boosting. - Anna Gambin; Ewa Szczurek (ICANNGA (1), 2007)

CTX-BLAST: context sensitive version of protein BLAST. - Anna Gambin; Piotr Wojtalewicz (Bioinform., 2007)

On consensus biomarker selection. - Janusz Dutkowski; Anna Gambin (BMC Bioinform., 2007)

New Metrics for Phylogenies. - Lukasz Bolikowski; Anna Gambin (Fundam. Informaticae, 2007)

Efficient Seeding Techniques for Protein Similarity Search. - Mikhail A. Roytberg; Anna Gambin; Laurent Noé; Slawomir Lasota 001; Eugenia Furletova; Ewa Szczurek; Gregory Kucherov (BIRD, 2008)

Aggregation Algorithms for Perturbed Markov Chains with Applications to Networks Modeling. - Anna Gambin; Piotr Krzyzanowski; Piotr Pokarowski (SIAM J. Sci. Comput., 2008)

Classification of peptide mass fingerprint data by novel no-regret boosting method. - Anna Gambin; Ewa Szczurek; Janusz Dutkowski; Magda Bakun; Michal Dadlez (Comput. Biol. Medicine, 2009)

Modeling Exopeptidase Activity from LC-MS Data. - Boguslaw Kluge; Anna Gambin; Wojciech Niemiro (J. Comput. Biol., 2009)

On Subset Seeds for Protein Alignment. - Mikhail A. Roytberg; Anna Gambin; Laurent Noé; Slawomir Lasota 001; Eugenia Furletova; Ewa Szczurek; Gregory Kucherov (IEEE ACM Trans. Comput. Biol. Bioinform., 2009)

Modeling Proteolysis from Mass Spectrometry Proteomic Data. - Anna Gambin; Boguslaw Kluge (Fundam. Informaticae, 2010)

Preface. - Anna Gambin; Damian Niwinski; Pawel Urzyczyn (Fundam. Informaticae, 2010)

Efficient Multiple Samples aCGH Analysis for Rare CNVs Detection. - Maciej Sykulski; Tomasz Gambin; Magdalena Bartnik; Katarzyna Derwinska; Barbara Wisniowiecka-Kowalnik; Pawel Stankiewicz; Anna Gambin (BIBM, 2011)

Subset Seed Extension to Protein BLAST. - Anna Gambin; Slawomir Lasota 001; Michal Startek; Maciej Sykulski; Laurent Noé; Gregory Kucherov (BIOINFORMATICS, 2011)

Robustness of Exon CGH Array Designs. - Tomasz Gambin; Pawel Stankiewicz; Maciej Sykulski; Anna Gambin (BIOINFORMATICS, 2011)

Inferring serum proteolytic activity from LC-MS/MS data. - Piotr Dittwald; Jerzy Ostrowski; Jakub Karczmarski; Anna Gambin (BMC Bioinform., 2012)

Tav4SB: integrating tools for analysis of kinetic models of biological systems. - Mikolaj Rybinski; Michal Lula; Pawel Banasik; Slawomir Lasota 001; Anna Gambin (BMC Syst. Biol., 2012)

Alan Turing and Systems Biology. - Anna Gambin; Anna K. Marciniak-Czochra; Damian Niwinski (ERCIM News, 2012)

Preface. - Anna Gambin; Anna K. Marciniak-Czochra (Fundam. Informaticae, 2012)

Functional performance of aCGH design for clinical cytogenetics. - Tomasz Gambin; Pawel Stankiewicz; Maciej Sykulski; Anna Gambin (Comput. Biol. Medicine, 2013)

Multiple samples aCGH analysis for rare CNVs detection. - Maciej Sykulski; Tomasz Gambin; Magdalena Bartnik; Katarzyna Derwinska; Barbara Wisniowiecka-Kowalnik; Pawel Stankiewicz; Anna Gambin (J. Clin. Bioinform., 2013)

StochDecomp - Matlab package for noise decomposition in stochastic biochemical systems. - Tomasz Jetka; Agata Charzynska; Anna Gambin; Michael P. H. Stumpf; Michal Komorowski (Bioinform., 2014)

Computational modeling of sphingolipid metabolism. - Weronika Wronowska; Agata Charzynska; Karol Nienaltowski; Anna Gambin (BMC Syst. Biol., 2015)

Improvement of the k-nn Entropy Estimator with Applications in Systems Biology. - Agata Charzynska; Anna Gambin (Entropy, 2016)

Inferring transposons activity chronology by TRANScendence - TEs database and de-novo mining tool. - Michal Startek; Jakub Nogly; Agnieszka Gromadka; Dariusz Grzebelus; Anna Gambin (BMC Bioinform., 2017)

Renal cell carcinoma classification: a case study of pitfalls associated with metabolic landscape analysis. - Krzysztof Gogolewski; Marcin Kostecki; Anna Gambin (BIBM, 2018)

TADeus-a tool for clinical interpretation of structural variants modifying chromatin organization. - Barbara Poszewiecka; Pawel Stankiewicz; Tomasz Gambin; Anna Gambin (BIBM, 2018)

PCA-like Methods for the Integration of Single Cell RNA-seq Data with Metabolic Networks. - Krzysztof Gogolewski; Anna Gambin (ICCABS, 2018)

Truncated Robust Principal Component Analysis and Noise Reduction for Single Cell RNA-seq Data. - Krzysztof Gogolewski; Maciej Sykulski; Neo Christopher Chung; Anna Gambin (ISBRA, 2018)

The Wasserstein Distance as a Dissimilarity Measure for Mass Spectra with Application to Spectral Deconvolution. - Szymon Majewski; Michal Aleksander Ciach; Michal Startek; Wanda Niemyska; Blazej Miasojedow; Anna Gambin (WABI, 2018)

Preface. - Anna Gambin; Monika Heiner (Fundam. Informaticae, 2018)

Estimation of Rates of Reactions Triggered by Electron Transfer in Top-Down Mass Spectrometry. - Michal Aleksander Ciach; Mateusz Krzysztof Lacki; Blazej Miasojedow; Frederik Lermyte; Dirk Valkenborg; Frank Sobott; Anna Gambin (J. Comput. Biol., 2018)

Jaccard/Tanimoto similarity test and estimation methods for biological presence-absence data. - Neo Christopher Chung; Blazej Miasojedow; Michal Startek; Anna Gambin (BMC Bioinform., 2019)

Truncated Robust Principal Component Analysis and Noise Reduction for Single Cell RNA Sequencing Data. - Krzysztof Gogolewski; Maciej Sykulski; Neo Christopher Chung; Anna Gambin (J. Comput. Biol., 2019)

Knot_pull - python package for biopolymer smoothing and knot detection. - Aleksandra I. Jarmolinska; Anna Gambin; Joanna I. Sulkowska (Bioinform., 2020)

Low Entropy Sub-Networks Prevent the Integration of Metabolomic and Transcriptomic Data. - Krzysztof Gogolewski; Marcin Kostecki; Anna Gambin (Entropy, 2020)

TADeus2: a web server facilitating the clinical diagnosis by pathogenicity assessment of structural variations disarranging 3D chromatin structure. - Barbara Poszewiecka; Victor Murcia Pienkowski; Karol Nowosad; Jérôme D. Robin; Krzysztof Gogolewski; Anna Gambin (Nucleic Acids Res., 2022)

Critical assessment of synthetic accessibility scores in computer-assisted synthesis planning. - Grzegorz Skoraczynski; Mateusz Kitlas; Blazej Miasojedow; Anna Gambin (J. Cheminformatics, 2023)