pldist: ecological dissimilarities for paired and longitudinal microbiome association analysis. - Anna M. Plantinga; Jun Chen; Robert R. Jenq; Michael C. Wu (Bioinform., 2019)

A Kernel-based Test of Independence for Cluster-correlated Data. - Hongjiao Liu; Anna M. Plantinga; Yunhua Xiang; Michael C. Wu (NeurIPS, 2021)

MiRKAT: kernel machine regression-based global association tests for the microbiome. - Nehemiah Wilson; Ni Zhao; Xiang Zhan; Hyunwook Koh; Weijia Fu; Jun Chen; Hongzhe Li; Michael C. Wu; Anna M. Plantinga (Bioinform., 2021)

Testing microbiome association using integrated quantile regression models. - Tianying Wang; Wodan Ling; Anna M. Plantinga; Michael C. Wu; Xiang Zhan (Bioinform., 2022)

Accommodating multiple potential normalizations in microbiome associations studies. - Hoseung Song; Wodan Ling; Ni Zhao; Anna M. Plantinga; Courtney A. Broedlow; Nichole R. Klatt; Tiffany Hensley-McBain; Michael C. Wu (BMC Bioinform., 2023)