PRDA: An R package for Prospective and Retrospective Design Analysis. - Claudio Zandonella Callegher; Giulia Bertoldo; Enrico Toffalini; Anna Vesely; Angela Andreella; Massimiliano Pastore; Gianmarco Altoé (J. Open Source Softw., 2021)

NetTDP: permutation-based true discovery proportions for differential co-expression network analysis. - Menglan Cai; Anna Vesely; Xu Chen 051; Limin Li; Jelle J. Goeman (Briefings Bioinform., 2022)