Reconstruction and analysis of the genetic and metabolic regulatory networks of the central metabolism of Bacillus subtilis. - Anne Goelzer; Fadia Bekkal-Brikci; Isabelle Martin-Verstraete; Philippe Noirot; Philippe Bessières; Stéphane Aymerich; Vincent Fromion (BMC Syst. Biol., 2008)

Stability Analysis for Bacterial Linear Metabolic Pathways with Monotone Control System Theory. - Nacim Meslem; Vincent Fromion; Anne Goelzer; Laurent Tournier (ICINCO (3), 2010)

Emergences de structures modulaires dans les régulations des systèmes biologiques: Théorie et application à Bacillus subtilis. - Anne Goelzer (2010)

Cell design in bacteria as a convex optimization problem. - Anne Goelzer; Vincent Fromion; Gérard Scorletti (Autom., 2011)

BasyLiCA: a tool for automatic processing of a Bacterial Live Cell Array. - Leslie Aïchaoui; Matthieu Jules; Ludovic Le Chat; Stéphane Aymerich; Vincent Fromion; Anne Goelzer (Bioinform., 2012)

Représentation systémique multi-échelle des processus biologiques de la bactérie. - Vincent Henry; Arnaud Ferré; Christine Froidevaux; Anne Goelzer; Vincent Fromion; Sarah Cohen Boulakia; Sandra Dérozier; Marc Dinh; Ghislain Fiévet; Stephan Fischer 002; Jean-François Gibrat; Valentin Loux; et al. (IC, 2016)

BiPOm: Biological Interlocked Process Ontology for Metabolism. How to Infer Molecule Knowledge from Biological Process? - Vincent Henry; Fatiha Saïs; Elodie Marchadier; Juliette Dibie; Anne Goelzer; Vincent Fromion (ICBO, 2017)

Optimization of a micro-organisms culture in a fedbatch bioreactor using an intracellular model. - Guillaume Jeanne; Sihem Tebbani; Anne Goelzer; Vincent Fromion; Didier Dumur (MED, 2017)

The bacterial interlocked process ONtology (BiPON): a systemic multi-scale unified representation of biological processes in prokaryotes. - Vincent Henry; Anne Goelzer; Arnaud Ferré; Stephan Fischer 002; Marc Dinh; Valentin Loux; Christine Froidevaux; Vincent Fromion (J. Biomed. Semant., 2017)

Towards a realistic and integrated strain design in batch bioreactor. - Guillaume Jeanne; Anne Goelzer; Sihem Tebbani; Didier Dumur; Vincent Fromion (CDC, 2018)

BiPOm: a rule-based ontology to represent and infer molecule knowledge from a biological process-centered viewpoint. - Vincent Henry; Fatiha Saïs; Olivier Inizan; Elodie Marchadier; Juliette Dibie; Anne Goelzer; Vincent Fromion (BMC Bioinform., 2020)

An Ontology to Structure Biological Data: The Contribution of Mathematical Models. - Olivier Inizan; Vincent Fromion; Anne Goelzer; Fatiha Saïs; Danai Symeonidou (MTSR, 2021)

BioSimulators: a central registry of simulation engines and services for recommending specific tools. - Bilal Shaikh; Lucian P. Smith; Dan Vasilescu; Gnaneswara Marupilla; Michael Wilson; Eran Agmon; Henry Agnew; Steven S. Andrews; Azraf Anwar; Moritz E. Beber; Frank T. Bergmann; David Brooks 006; et al. (CoRR, 2022)

BioSimulators: a central registry of simulation engines and services for recommending specific tools. - Bilal Shaikh; Lucian P. Smith; Dan Vasilescu; Gnaneswara Marupilla; Michael Wilson; Eran Agmon; Henry Agnew; Steven S. Andrews; Azraf Anwar; Moritz E. Beber; Frank T. Bergmann; David Brooks 006; et al. (Nucleic Acids Res., 2022)