Systematic assignment of thermodynamic constraints in metabolic network models. - Anne Kümmel; Sven Panke; Matthias Heinemann (BMC Bioinform., 2006)

anNET: a tool for network-embedded thermodynamic analysis of quantitative metabolome data. - Nicola Zamboni; Anne Kümmel; Matthias Heinemann (BMC Bioinform., 2008)

System-Level Insights into Yeast Metabolism by Thermodynamic Analysis of Elementary Flux Modes. - Stefan J. Jol; Anne Kümmel; Marco Terzer; Jörg Stelling; Matthias Heinemann (PLoS Comput. Biol., 2012)