Combining NLP and probabilistic categorisation for document and term selection for Swiss-Prot medical annotation. - Pavel B. Dobrokhotov; Cyril Goutte; Anne-Lise Veuthey; Éric Gaussier (ISMB (Supplement of Bioinformatics), 2003)

A Probabilistic Information Retrieval Approach to Medical Annotation in SWISS-PROT. - Pavel B. Dobrokhotov; Cyril Goutte; Anne-Lise Veuthey; Éric Gaussier (MIE, 2003)

Automated annotation of microbial proteomes in SWISS-PROT. - Alexandre Gattiker; Karine Michoud; Catherine Rivoire; Andrea H. Auchincloss; Elisabeth Coudert; Tania Lima; Paul J. Kersey; Marco Pagni; Christian J. A. Sigrist; Corinne Lachaize; Anne-Lise Veuthey; Elisabeth Gasteiger; et al. (Comput. Biol. Chem., 2003)

Corpus-Based vs. Model-Based Selection of Relevant Features. - Cyril Goutte; Pavel B. Dobrokhotov; Éric Gaussier; Anne-Lise Veuthey (CORIA, 2004)

Latent Argumentative Pruning for Compact MEDLINE Indexing. - Patrick Ruch; Robert H. Baud; Johan Marty; Antoine Geissbühler; Imad Tbahriti; Anne-Lise Veuthey (AIME, 2005)

Extracting Key Sentences with Latent Argumentative Structuring. - Patrick Ruch; Robert H. Baud; Christine Chichester; Antoine Geissbühler; Frédérique Lisacek; Johan Marty; Dietrich Rebholz-Schuhmann; Imad Tbahriti; Anne-Lise Veuthey (MIE, 2005)

GPSDB: a new database for synonyms expansion of gene and protein names. - Violaine Pillet; Marc Zehnder; Alexander K. Seewald; Anne-Lise Veuthey; Johann Petrak (Bioinform., 2005)

Assisting medical annotation in Swiss-Prot using statistical classifiers. - Pavel B. Dobrokhotov; Cyril Goutte; Anne-Lise Veuthey; Éric Gaussier (Int. J. Medical Informatics, 2005)

Recherche d'information et analyse bibliographique appliquées à la mise à jour automatique de Swiss-Prot. - Imad Tbahriti; Anne-Lise Veuthey; Patrick Ruch; Julien Gobeill (CORIA, 2007)

Using Discourse Analysis to Improve Text Categorization in MEDLINE. - Patrick Ruch; Antoine Geissbühler; Julien Gobeill; Frédéric Lisacek; Imad Tbahriti; Anne-Lise Veuthey; Alan R. Aronson (MedInfo, 2007)

Using argumentation to extract key sentences from biomedical abstracts. - Patrick Ruch; Célia Boyer; Christine Chichester; Imad Tbahriti; Antoine Geissbühler; Paul Fabry; Julien Gobeill; Violaine Pillet; Dietrich Rebholz-Schuhmann; Christian Lovis; Anne-Lise Veuthey (Int. J. Medical Informatics, 2007)

Retrieving Mutation-Specific Information for Human proteins in UniProt/Swiss-PROT knowledgebase. - Yum Lina Yip; Nathalie Lachenal; Violaine Pillet; Anne-Lise Veuthey (J. Bioinform. Comput. Biol., 2007)

Mapping protein information to disease terminologies. - Anaïs Mottaz; Yum Lina Yip; Patrick Ruch; Anne-Lise Veuthey (J. Integr. Bioinform., 2007)

Gene Ontology density estimation and discourse analysis for automatic GeneRiF extraction. - Julien Gobeill; Imad Tbahriti; Frédéric Ehrler; Anaïs Mottaz; Anne-Lise Veuthey; Patrick Ruch (BMC Bioinform., 2008)

Mapping proteins to disease terminologies: from UniProt to MeSH. - Anaïs Mottaz; Yum Lina Yip; Patrick Ruch; Anne-Lise Veuthey (BMC Bioinform., 2008)

Easy retrieval of single amino-acid polymorphisms and phenotype information using SwissVar. - Anaïs Mottaz; Fabrice P. A. David; Anne-Lise Veuthey; Yum Lina Yip (Bioinform., 2010)

A Preliminary Study on the Prediction of Human Protein Functions. - Guido Bologna; Anne-Lise Veuthey; Marco Pagni; Lydie Lane; Amos Bairoch (IWINAC (1), 2011)

Text mining for the biocuration workflow. - Lynette Hirschman; Gully A. P. C. Burns; Martin Krallinger; Cecilia N. Arighi; K. Bretonnel Cohen; Alfonso Valencia; Cathy H. Wu; Andrew Chatr-aryamontri; Karen G. Dowell; Eva Huala; Anália Lourenço; Robert S. Nash; et al. (Database J. Biol. Databases Curation, 2012)

Application of text-mining for updating protein post-translational modification annotation in UniProtKB. - Anne-Lise Veuthey; Alan J. Bridge; Julien Gobeill; Patrick Ruch; Johanna R. McEntyre; Lydie Bougueleret; Ioannis Xenarios (BMC Bioinform., 2013)

Motifs tree: a new method for predicting post-translational modifications. - Christophe Charpilloz; Anne-Lise Veuthey; Bastien Chopard; Jean-Luc Falcone (Bioinform., 2014)