Capacity building for whole genome sequencing of Mycobacterium tuberculosis and bioinformatics in high TB burden countries. - Emmanuel Rivière; Tim H. Heupink; Nabila Ismail; Anzaan Dippenaar; Charlene Clarke; Gemeda Abebe; Peter van Heusden; Rob Warren 001; Conor J. Meehan; Annelies Van Rie (Briefings Bioinform., 2021)

Detection of minor variants in Mycobacterium tuberculosis whole genome sequencing data. - Sander N. Goossens; Tim H. Heupink; Elise De Vos; Anzaan Dippenaar; Margaretha De Vos; Rob Warren 001; Annelies Van Rie (Briefings Bioinform., 2022)

A treatment recommender clinical decision support system for personalized medicine: method development and proof-of-concept for drug resistant tuberculosis. - Lennert Verboven; Toon Calders; Steven Callens; John Black; Gary Maartens; Kelly E. Dooley; Samantha Potgieter; Robin M. Warren; Kris Laukens; Annelies Van Rie (BMC Medical Informatics Decis. Mak., 2022)

The MAGMA pipeline for comprehensive genomic analyses of clinical Mycobacterium tuberculosis samples. - Tim H. Heupink; Lennert Verboven; Abhinav Sharma; Vincent Rennie; Miguel de Diego Fuertes; Robin M. Warren; Annelies Van Rie (PLoS Comput. Biol., 2023)