Challenges of comprehensive automatic coding of presenting complaints. - Annie E. Bowles; Hannah Eyre; Scott L. DuVall; Olga V. Patterson (AMIA, 2021)

Comprehensive Mapping of Presenting Symptoms in the Emergency Department and Inpatient Setting. - Christopher R. Wilson; Annie E. Bowles; Hannah Eyre; Scott L. DuVall; Olga V. Patterson (AMIA, 2022)

An NLP Framework for the Extraction of Concept Measurements from Radiology and Pathology Notes. - Annie E. Bowles; Cris Perez; Anil Vachani; Jennifer Steltz; Brent Rose; Alex K. Bryant; Hannah Eyre; Scott L. DuVall; Julie A. Lynch; Patrick R. Alba (MedInfo, 2023)

A deep learning approach for medication disposition and corresponding attributes extraction. - Qiwei Gan; Mengke Hu; Kelly S. Peterson; Hannah Eyre; Patrick R. Alba; Annie E. Bowles; Johnathan C. Stanley; Scott L. DuVall; Jianlin Shi (J. Biomed. Informatics, 2023)

Accelerating Clinical NLP at Scale with a Hybrid Framework with Reduced GPU Demands: A Case Study in Dementia Identification. - Jianlin Shi; Qiwei Gan; Elizabeth Hanchrow; Annie E. Bowles; Johnathan C. Stanley; Adam Bress; Jordana B. Cohen; Patrick R. Alba (CoRR, 2025)