Algorithm-driven Artifacts in median polish summarization of Microarray data. - Federico M. Giorgi; Anthony M. Bolger; Marc Lohse; Björn Usadel (BMC Bioinform., 2010)

Visualizing large, high-throughput datasets based on the cognitive representation of biological pathways. - Axel Nagel; Marc Lohse; Anthony M. Bolger; Mark Stitt; Björn Usadel (Human Vision and Electronic Imaging, 2011)

RobiNA: a user-friendly, integrated software solution for RNA-Seq-based transcriptomics. - Marc Lohse; Anthony M. Bolger; Axel Nagel; Alisdair R. Fernie; John E. Lunn; Mark Stitt; Björn Usadel (Nucleic Acids Res., 2012)

Trimmomatic: a flexible trimmer for Illumina sequence data. - Anthony M. Bolger; Marc Lohse; Björn Usadel (Bioinform., 2014)

PAGANtec: OpenMP Parallel Error Correction for Next-Generation Sequencing Data. - Markus Joppich; Dirk Schmidl; Anthony M. Bolger; Torsten W. Kuhlen; Björn Usadel (IWOMP, 2015)

Data and Process Harmonisation of Multi-National, Multi-Site Research Data. - Jonathan Turner; Sinéad Impey; Frances Gibbons; Anthony M. Bolger; Gaye Stephens; Lucy Hederman; Ramisa Hamed; Ciara O'Meara; Ferran de la Varga; John Kommala; Matthew Nicholson; Daniel Farrell; et al. (MIE, 2024)