pez: phylogenetics for the environmental sciences. - William D. Pearse; Marc W. Cadotte; Jeannine Cavender-Bares; Anthony R. Ives; Caroline M. Tucker; Steve C. Walker; Matthew R. Helmus (Bioinform., 2015)

Improving the mapping of crop types in the Midwestern U.S. by fusing Landsat and MODIS satellite data. - Likai Zhu; Volker C. Radeloff; Anthony R. Ives (Int. J. Appl. Earth Obs. Geoinformation, 2017)

rr2: An R package to calculate R2s for regression models. - Anthony R. Ives; Daijiang Li (J. Open Source Softw., 2018)

Semiparametric Regression for Spatial Data via Deep Learning. - Kexuan Li; Jun Zhu; Anthony R. Ives; Volker C. Radeloff; Fangfang Wang (CoRR, 2023)

remotePARTS: Spatiotemporal autoregression analyses for large data sets. - Clay J. Morrow; Anthony R. Ives (J. Open Source Softw., 2025)