Evidence for Sequential and Increasing Activation of Replication Origins along Replication Timing Gradients in the Human Genome. - Guillaume Guilbaud; Aurélien Rappailles; Antoine Baker; Chun-Long Chen; Alain Arneodo; Arach Goldar; Yves D'Aubenton-Carafa; Claude Thermes; Benjamin Audit; Olivier Hyrien (PLoS Comput. Biol., 2011)

Replication Fork Polarity Gradients Revealed by Megabase-Sized U-Shaped Replication Timing Domains in Human Cell Lines. - Antoine Baker; Benjamin Audit; Chun-Long Chen; Benoit Moindrot; Antoine Leleu; Guillaume Guilbaud; Aurélien Rappailles; Cédric Vaillant; Arach Goldar; Fabien Mongelard; Yves D'Aubenton-Carafa; Olivier Hyrien; et al. (PLoS Comput. Biol., 2012)

Relating mammalian replication program to large-scale chromatin folding. - Benjamin Audit; Antoine Baker; Rasha E. Boulos; Hanna Julienne; Alain Arneodo; C. L. Chen; Yves d'Aubenton-Carafa; Claude Thermes; Arach Goldar; Guillaume Guilbaud; Aurélien Rappailles; Olivier Hyrien (BCB, 2013)

On the Universality of Noiseless Linear Estimation with Respect to the Measurement Matrix. - Alia Abbara; Antoine Baker; Florent Krzakala; Lenka Zdeborová (CoRR, 2019)

Exact asymptotics for phase retrieval and compressed sensing with random generative priors. - Benjamin Aubin; Bruno Loureiro; Antoine Baker; Florent Krzakala; Lenka Zdeborová (MSML, 2020)

TRAMP: Compositional Inference with TRee Approximate Message Passing. - Antoine Baker; Benjamin Aubin; Florent Krzakala; Lenka Zdeborová (CoRR, 2020)

Epidemic mitigation by statistical inference from contact tracing data. - Antoine Baker; Indaco Biazzo; Alfredo Braunstein; Giovanni Catania; Luca Dall'Asta; Alessandro Ingrosso; Florent Krzakala; Fabio Mazza; Marc Mézard; Anna Paola Muntoni; Maria Refinetti; Stefano Sarao Mannelli; et al. (CoRR, 2020)

SiMCa: Sinkhorn Matrix Factorization with Capacity Constraints. - Eric Daoud; Luca Ganassali; Antoine Baker; Marc Lelarge (CoRR, 2022)

Tree-AMP: Compositional Inference with Tree Approximate Message Passing. - Antoine Baker; Florent Krzakala; Benjamin Aubin; Lenka Zdeborová (J. Mach. Learn. Res., 2023)