Update on XplorMed: a web server for exploring scientific literature. - Carolina Perez-Iratxeta; Antonio J. Pérez-Pulido; Peer Bork; Miguel A. Andrade (Nucleic Acids Res., 2003)

Gene annotation from scientific literature using mappings between keyword systems. - Antonio J. Pérez-Pulido; Carolina Perez-Iratxeta; Peer Bork; Guillermo Thode; Miguel A. Andrade (Bioinform., 2004)

AnaGram: protein function assignment. - Antonio J. Pérez-Pulido; Guillermo Thode; Oswaldo Trelles (Bioinform., 2004)

Services Integration and Task-scheduling in Bioinformatics Grids. - Sergio Ramírez; Enrique de-Andrés; Ismael Navas-Delgado; Antonio J. Pérez-Pulido; José Francisco Aldana Montes; Oswaldo Trelles (PARCO, 2005)

Distributed Execution of Workflows in the INB. - Ismael Navas-Delgado; Antonio J. Pérez-Pulido; José Francisco Aldana Montes; Oswaldo Trelles (DILS, 2006)

Intelligent client for integrating bioinformatics services. - Ismael Navas-Delgado; Maria del Mar Rojano-Muñoz; Sergio Ramírez; Antonio J. Pérez-Pulido; Eduardo Andrés León; José Francisco Aldana Montes; Oswaldo Trelles (Bioinform., 2006)

MOWServ: a web client for integration of bioinformatic resources. - Sergio Ramírez; Antonio Muñoz-Merida; Tor Johan Mikael Karlsson; Maximiliano García; Antonio J. Pérez-Pulido; M. Gonzalo Claros; Oswaldo Trelles (Nucleic Acids Res., 2010)

A biclustering algorithm for extracting bit-patterns from binary datasets. - Domingo S. Rodríguez-Baena; Antonio J. Pérez-Pulido; Jesús S. Aguilar-Ruiz (Bioinform., 2011)

Classification of protein motifs based on subcellular localization uncovers evolutionary relationships at both sequence and functional levels. - Marcos Parras-Moltó; Francisco J. Campos-Laborie; Juan García-Diéguez; M. R. Rodríguez-Griñolo; Antonio J. Pérez-Pulido (BMC Bioinform., 2013)

Automated selection of homologs to track the evolutionary history of proteins. - Pablo Mier; Antonio J. Pérez-Pulido; Miguel A. Andrade-Navarro (BMC Bioinform., 2018)

CRISPR sequences are sometimes erroneously translated and can contaminate public databases with spurious proteins containing spaced repeats. - Alejandro Rubio; Pablo Mier; Miguel A. Andrade-Navarro; Andrés Garzón; Juan Jiménez; Antonio J. Pérez-Pulido (Database J. Biol. Databases Curation, 2020)

Using AnABlast for intergenic sORF prediction in the Caenorhabditis elegans genome. - C. S. Casimiro-Soriguer; M. M. Rigual; Ana M. Brokate-Llanos; Manuel J. Muñoz; Andrés Garzón; Antonio J. Pérez-Pulido; Juan Jiménez (Bioinform., 2020)

Serial co-expression analysis of host factors from SARS-CoV viruses highly converges with former high-throughput screenings and proposes key regulators. - Antonio J. Pérez-Pulido; Gualberto Asencio-Cortés; Ana M. Brokate-Llanos; Gloria Brea-Calvo; Rosario Rodríguez-Griñolo; Andrés Garzón; Manuel J. Muñoz (Briefings Bioinform., 2021)

Assessment of selection pressure exerted on genes from complete pangenomes helps to improve the accuracy in the prediction of new genes. - Alejandro Rubio; Juan Jiménez; Antonio J. Pérez-Pulido (Briefings Bioinform., 2022)