Research challenges in environmental observation and forecasting systems. - David C. Steere; António M. Baptista; Dylan McNamee; Calton Pu; Jonathan Walpole (MobiCom, 2000)

Implicit solvation in the self-consistent mean field theory method: sidechain modelling and prediction of folding free energies of protein mutants. - Joaquim Mendes; António M. Baptista; Maria Arménia Carrondo; Cláudio M. Soares (J. Comput. Aided Mol. Des., 2001)

Parameterized Novelty Detectors for Environmental Sensor Monitoring. - Cynthia Archer; Todd K. Leen; António M. Baptista (NIPS, 2003)

Understanding Ecosystems through Observation and Simulation. - António M. Baptista (IEEE Symposium on Parallel and Large-Data Visualization and Graphics, 2003)

Visualizing Spatial and Temporal Variability in Coastal Observatories. - Walter Jiménez; Wagner Toledo Corrêa; Cláudio T. Silva; António M. Baptista (IEEE Visualization, 2003)

Near Optimal Sensor Selection in the COlumbia RIvEr (CORIE) Observation Network for Data Assimilation Using Genetic Algorithms. - Xuan Thanh Dang; Sergey Frolov; Nirupama Bulusu; Wu-chi Feng; António M. Baptista (DCOSS, 2007)

Adaptive sampling in the COlumbia RIvEr observation network. - Xuan Thanh Dang; Nirupama Bulusu; Wu-chi Feng; Sergey Frolov; António M. Baptista (SenSys, 2007)

Fast neural network surrogates for very high dimensional physics-based models in computational oceanography. - Rudolph van der Merwe; Todd K. Leen; Zhengdong Lu; Sergey Frolov; António M. Baptista (Neural Networks, 2007)

Erratum to "Fast neural network surrogates for very high dimensional physics-based models in computational oceanography" [Neural Netw. 20(4) (2007) 462-478]. - Rudolph van der Merwe; Todd K. Leen; Zhengdong Lu; Sergey Frolov; António M. Baptista (Neural Networks, 2007)

End-to-End eScience: Integrating Workflow, Query, Visualization, and Provenance at an Ocean Observatory. - Bill Howe; Peter Lawson; Renee Bellinger; Erik W. Anderson; Emanuele Santos; Juliana Freire; Carlos Eduardo Scheidegger; António M. Baptista; Cláudio T. Silva (eScience, 2008)

Scientific Exploration in the Era of Ocean Observatories. - António M. Baptista; Bill Howe; Juliana Freire; David Maier 001; Cláudio T. Silva (Comput. Sci. Eng., 2008)

Inter-domain Communication Mechanisms in an ABC Importer: A Molecular Dynamics Study of the MalFGK2E Complex. - A. Sofia F. Oliveira; António M. Baptista; Cláudio M. Soares (PLoS Comput. Biol., 2011)

Navigating Oceans of Data. - David Maier 001; V. M. Megler; António M. Baptista; Alex Jaramillo; Charles Seaton; Paul J. Turner (SSDBM, 2012)

Analyzing the Molecular Basis of Enzyme Stability in Ethanol/Water Mixtures Using Molecular Dynamics Simulations. - Diana Lousa; António M. Baptista; Cláudio M. Soares (J. Chem. Inf. Model., 2012)

Structural Determinants for the Membrane Insertion of the Transmembrane Peptide of Hemagglutinin from Influenza Virus. - Bruno L. Victor; António M. Baptista; Cláudio M. Soares (J. Chem. Inf. Model., 2012)

US Experience Will Advance Gulf Ecosystem Research. - Nabil Abdel-Jabbar; António M. Baptista; Tuomas Karna; Paul J. Turner; Gautam Sen (GRMSE (2), 2013)

Structural Effects of pH and Deacylation on Surfactant Protein C in an Organic Solvent Mixture: A Constant-pH MD Study. - Catarina A. Carvalheda; Sara R. R. Campos; Miguel Machuqueiro; António M. Baptista (J. Chem. Inf. Model., 2013)

Exploring O2 Diffusion in A-Type Cytochrome c Oxidases: Molecular Dynamics Simulations Uncover Two Alternative Channels towards the Binuclear Site. - A. Sofia F. Oliveira; João M. Damas; António M. Baptista; Cláudio M. Soares (PLoS Comput. Biol., 2014)

The Effect of Membrane Environment on Surfactant Protein C Stability Studied by Constant-pH Molecular Dynamics. - Catarina A. Carvalheda; Sara R. R. Campos; António M. Baptista (J. Chem. Inf. Model., 2015)

Correction to "Structural Effects of pH and Deacylation on Surfactant Protein C in an Organic Solvent Mixture: A Constant-pH MD Study". - Catarina A. Carvalheda; Sara R. R. Campos; Miguel Machuqueiro; António M. Baptista (J. Chem. Inf. Model., 2015)

Effect of a pH Gradient on the Protonation States of Cytochrome c Oxidase: A Continuum Electrostatics Study. - Pedro R. Magalhães; A. Sofia F. Oliveira; Sara R. R. Campos; Cláudio M. Soares; António M. Baptista (J. Chem. Inf. Model., 2017)

FixBox: A General Algorithm to Fix Molecular Systems in Periodic Boxes. - António M. Baptista; Lucie da Rocha; Sara R. R. Campos (J. Chem. Inf. Model., 2022)