Evolutionary method for the assembly of rigid protein fragments. - David de Sancho; Lidia Prieto; Ana M. Rubio; Antonio Rey (J. Comput. Chem., 2005)

Evaluation of coarse grained models for hydrogen bonds in proteins. - David de Sancho; Antonio Rey (J. Comput. Chem., 2007)

Energy minimizations with a combination of two knowledge-based potentials for protein folding. - David de Sancho; Antonio Rey (J. Comput. Chem., 2008)

Topology-based models and NMR structures in protein folding simulations. - M. Fernanda Rey-Stolle; Marta Enciso; Antonio Rey (J. Comput. Chem., 2009)

Design of a Rotamer Library for Coarse-Grained Models in Protein-Folding Simulations. - María Larriva; Antonio Rey (J. Chem. Inf. Model., 2014)

Benchmarking residue-resolution protein coarse-grained models for simulations of biomolecular condensates. - Alejandro Feito; Ignacio Sanchez-Burgos; Ignacio Tejero; Eduardo Sanz; Antonio Rey; Rosana Collepardo-Guevara; Andres R. Tejedor; Jorge R. Espinosa (PLoS Comput. Biol., 2025)