A hint to search for metalloproteins in gene banks. - Claudia Andreini; Ivano Bertini; Antonio Rosato (Bioinform., 2004)

Improving Prediction of Zinc Binding Sites by Modeling the Linkage Between Residues Close in Sequence. - Sauro Menchetti; Andrea Passerini; Paolo Frasconi; Claudia Andreini; Antonio Rosato (RECOMB, 2006)

Predicting zinc binding at the proteome level. - Andrea Passerini; Claudia Andreini; Sauro Menchetti; Antonio Rosato; Paolo Frasconi (BMC Bioinform., 2007)

Role of the N-Terminal Tail of Metal-Transporting P1B-type ATPases from Genome-Wide Analysis and Molecular Dynamics Simulations. - Shailesh Sharma; Antonio Rosato (J. Chem. Inf. Model., 2009)

WeNMR: Structural Biology on the Grid. - Tsjerk A. Wassenaar; Marc van Dijk; Nuno Loureiro-Ferreira; Gijs van der Schot; Sjoerd Jacob de Vries; Christophe Schmitz; Johan van der Zwan; Rolf Boelens; Andrea Giachetti 002; Lucio Ferella; Antonio Rosato; Ivano Bertini; et al. (IWSG-Life, 2011)

A Grid-enabled web portal for NMR structure refinement with AMBER. - Ivano Bertini; David A. Case; Lucio Ferella; Andrea Giachetti 002; Antonio Rosato (Bioinform., 2011)

A Simple Protocol for the Comparative Analysis of the Structure and Occurrence of Biochemical Pathways Across Superkingdoms. - Claudia Andreini; Ivano Bertini; Gabriele Cavallaro; Leonardo Decaria; Antonio Rosato (J. Chem. Inf. Model., 2011)

WeNMR: Structural Biology on the Grid. - Tsjerk A. Wassenaar; Marc van Dijk; Nuno Loureiro-Ferreira; Gijs van der Schot; Sjoerd Jacob de Vries; Christophe Schmitz; Johan van der Zwan; Rolf Boelens; Andrea Giachetti 002; Lucio Ferella; Antonio Rosato; Ivano Bertini; et al. (J. Grid Comput., 2012)

RPF: a quality assessment tool for protein NMR structures. - Yuanpeng Janet Huang; Antonio Rosato; Gautam Singh; Gaetano T. Montelione (Nucleic Acids Res., 2012)

MetalS2: A Tool for the Structural Alignment of Minimal Functional Sites in Metal-Binding Proteins and Nucleic Acids. - Claudia Andreini; Gabriele Cavallaro; Antonio Rosato; Yana Valasatava (J. Chem. Inf. Model., 2013)

MetalPDB: a database of metal sites in biological macromolecular structures. - Claudia Andreini; Gabriele Cavallaro; Serena Lorenzini; Antonio Rosato (Nucleic Acids Res., 2013)

MetalPredator: a web server to predict iron-sulfur cluster binding proteomes. - Yana Valasatava; Antonio Rosato; Lucia Banci; Claudia Andreini (Bioinform., 2016)

The future of metabolomics in ELIXIR. - Merlijn N. van Rijswijk; Charlie Beirnaert; Christophe Caron; Marta Cascante; Victoria Dominguez Del Angel; Warwick B. Dunn; Timothy M. D. Ebbels; Franck Giacomoni; Alejandra N. González-Beltrán; Thomas Hankemeier; Kenneth Haug; Jose L. Izquierdo-García; et al. (F1000Research, 2017)

Investigation of the Iron(II) Release Mechanism of Human H-Ferritin as a Function of pH. - Davide Sala; Silvia Ciambellotti; Andrea Giachetti 002; Paola Turano; Antonio Rosato (J. Chem. Inf. Model., 2017)

MetalPDB in 2018: a database of metal sites in biological macromolecular structures. - Valeria Putignano; Antonio Rosato; Lucia Banci; Claudia Andreini (Nucleic Acids Res., 2018)

Loss aversion and competition in Vickrey auctions: Money ain't no good. - Antonio Rosato; Agnieszka Tymula (Games Econ. Behav., 2019)

Upgrading and Validation of the AMBER Force Field for Histidine and Cysteine Zinc(II)-Binding Residues in Sites with Four Protein Ligands. - Marina Macchiagodena; Marco Pagliai; Claudia Andreini; Antonio Rosato; Piero Procacci (J. Chem. Inf. Model., 2019)

Structural biology in the clouds: The WeNMR-EOSC Ecosystem. - Rodrigo Vargas Honorato; Panagiotis I. Koukos; Brian Jiménez-García; Andrei Tsaregorodtsev; Marco Verlato; Andrea Giachetti 002; Antonio Rosato; Alexandre M. J. J. Bonvin (CoRR, 2021)

Automated Determination of Nuclear Magnetic Resonance Chemical Shift Perturbations in Ligand Screening Experiments: The PICASSO Web Server. - Vincenzo Laveglia; Andrea Giachetti 002; Linda Cerofolini; Kevin Haubrich; Marco Fragai; Alessio Ciulli; Antonio Rosato (J. Chem. Inf. Model., 2021)

Insights into the Dynamics of the Human Zinc Transporter ZnT8 by MD Simulations. - Davide Sala; Andrea Giachetti 002; Antonio Rosato (J. Chem. Inf. Model., 2021)

Expectations-Based Loss Aversion in Auctions with Interdependent Values: Extensive vs. Intensive Risk. - Benjamin Balzer; Antonio Rosato (Manag. Sci., 2021)

Learning to Identify Physiological and Adventitious Metal-Binding Sites in the Three-Dimensional Structures of Proteins by Following the Hints of a Deep Neural Network. - Vincenzo Laveglia; Andrea Giachetti 002; Davide Sala; Claudia Andreini; Antonio Rosato (J. Chem. Inf. Model., 2022)

Dutch vs. first-price auctions with expectations-based loss-averse bidders. - Benjamin Balzer; Antonio Rosato; Jonas von Wangenheim (J. Econ. Theory, 2022)

PDBe-KB: collaboratively defining the biological context of structural data. - Mihaly Varadi; Stephen Anyango; David R. Armstrong; John M. Berrisford; Preeti Choudhary; Mandar S. Deshpande; Nurul Nadzirin; Sreenath Nair; Lukás Pravda; Ahsan Tanweer; Bissan Al-Lazikani; Claudia Andreini; et al. (Nucleic Acids Res., 2022)

Hunting down zinc(II)-binding sites in proteins with distance matrices. - Vincenzo Laveglia; Milana Bazayeva; Claudia Andreini; Antonio Rosato (Bioinform., 2023)

Experimental validation of a mathematical model for sizing end-of-production-line test benches for electric motors of electric vehicle. - Emiliano Lustrissimi; Antonio Rosato; Sebastiano Caravaggi; Bonifacio Bianco (IECON, 2024)

Benchmarking Zinc-Binding Site Predictors: A Comparative Analysis of Structure-Based Approaches. - Cosimo Ciofalo; Vincenzo Laveglia; Claudia Andreini; Antonio Rosato (J. Chem. Inf. Model., 2025)

Correction to "Benchmarking Zinc-Binding Site Predictors: A Comparative Analysis of Structure-Based Approaches". - Cosimo Ciofalo; Vincenzo Laveglia; Claudia Andreini; Antonio Rosato (J. Chem. Inf. Model., 2025)

Never say never: Optimal exclusion and reserve prices with expectations-based loss-averse buyers. - Benjamin Balzer; Antonio Rosato (J. Econ. Theory, 2025)