Reduction factors in finite automata with application to nonlinear filters. - Antti Niemistö; Olli Yli-Harja; Antti Valmari; Pertti Koivisto; Ilya Shmulevich (EUSIPCO, 2000)

Breakdown probabilities of recursive stack filters. - Pertti Koivisto; Olli Yli-Harja; Antti Niemistö; Ilya Shmulevich (Signal Process., 2001)

Statistical characterization of detail preservation. - Heikki Huttunen; Pertti T. Koivisto; Antti Niemistö; Olli Yli-Harja (Image Processing: Algorithms and Systems, 2003)

Estimation of population effects in synchronized budding yeast experiments. - Antti Niemistö; Tommi Aho; Henna Thesleff; Mikko Tiainen; Kalle Marjanen; Marja-Leena Linne; Olli Yli-Harja (Image Processing: Algorithms and Systems, 2003)

Correction of Misclassifications Using a Proximity-Based Estimation Method. - Antti Niemistö; Ilya Shmulevich; Vladimir Vasilyevich Lukin; Alexander N. Dolia; Olli Yli-Harja (EURASIP J. Adv. Signal Process., 2004)

Robust quantification of in vitro angiogenesis through image analysis. - Antti Niemistö; Valerie Dunmire; Olli Yli-Harja; Wei Zhang 011; Ilya Shmulevich (IEEE Trans. Medical Imaging, 2005)

Extraction of the Number of Peroxisomes in Yeast Cells by Automated Image Analysis. - Antti Niemistö; Jyrki Selinummi; Ramsey Saleem; Ilya Shmulevich; John D. Aitchison; Olli Yli-Harja (EMBC, 2006)

Quantitative image analysis methods for applications in biomedical microscopy. - Antti Niemistö (2006)

Computational Methods for Estimation of Cell Cycle Phase Distributions of Yeast Cells. - Antti Niemistö; Matti Nykter; Tommi Aho; Henna Jalovaara; Kalle Marjanen; Miika Ahdesmäki; Pekka Ruusuvuori; Mikko Tiainen; Marja-Leena Linne; Olli Yli-Harja (EURASIP J. Bioinform. Syst. Biol., 2007)

A novel method for splitting clumps of convex objects incorporating image intensity and using rectangular window-based concavity point-pair search. - Muhammad Farhan; Olli Yli-Harja; Antti Niemistö (Pattern Recognit., 2013)