Simulation tools for biochemical networks: evaluation of performance and usability. - Antti Pettinen; Tommi Aho; Olli-Pekka Smolander; Tiina Manninen; Antti Saarinen; Kaisa-Leena Taattola; Olli Yli-Harja; Marja-Leena Linne (Bioinform., 2005)

Modeling single neuron behavior using stochastic differential equations. - Antti Saarinen; Marja-Leena Linne; Olli Yli-Harja (Neurocomputing, 2006)

Stochastic Differential Equation Model for Cerebellar Granule Cell Excitability. - Antti Saarinen; Marja-Leena Linne; Olli Yli-Harja (PLoS Comput. Biol., 2008)