Constraint-based analysis of metabolic capacity of Salmonella typhimurium during host-pathogen interaction. - Anu Raghunathan; Jennifer L. Reed; Sook-Il Shin; Bernhard Ø. Palsson; Simon Daefler (BMC Syst. Biol., 2009)

Systems approach to investigating host-pathogen interactions in infections with the biothreat agent Francisella. Constraints-based model of Francisella tularensis. - Anu Raghunathan; Sook-Il Shin; Simon Daefler (BMC Syst. Biol., 2010)

A community effort towards a knowledge-base and mathematical model of the human pathogen Salmonella Typhimurium LT2. - Ines Thiele; Daniel R. Hyduke; Benjamin Steeb; Guy Fankam; Douglas K. Allen; Susanna Bazzani; Pep Charusanti; Feng-Chi Chen; Ronan M. T. Fleming; Chao A. Hsiung; Sigrid C. J. De Keersmaecker; Yu-Chieh Liao; et al. (BMC Syst. Biol., 2011)

A scalable metabolite supplementation strategy against antibiotic resistant pathogen Chromobacterium violaceum induced by NAD+/NADH+ imbalance. - Deepanwita Banerjee; Dharmeshkumar Parmar; Nivedita Bhattacharya; Avinash D. Ghanate; Venkateswarlu Panchagnula; Anu Raghunathan (BMC Syst. Biol., 2017)

Integrated constraints based analysis of an engineered violacein pathway in Escherichia coli. - Selva Rupa Christinal Immanuel; Deepanwita Banerjee; Mayooreshwar P. Rajankar; Anu Raghunathan (Biosyst., 2018)