ELITE: Efficiently Locating Insertions of Transposable Elements. - Anwica Kashfeen; Harper B. Fauni; Timothy A. Bell; Fernando Pardo-Manuel de Villena; Leonard McMillan (BCB, 2019)

Frontier: finding the boundaries of novel transposable element insertions in genomes. - Anwica Kashfeen; Leonard McMillan (BCB, 2021)

Identifying and Characterizing transposable Elements in the genome. - Anwica Kashfeen (2022)