Machine learning approach for classifying histone modifications. - Aparna Gorthi; Ravi Jain; Nevenka Dimitrova (GENSiPS, 2009)

Computational tools for genome-wide R-loops identification and characterisation. - Rongjie Liu; Aparna Gorthi; Yufang Jin; Alexander J. R. Bishop; Yidong Chen 002 (Int. J. Comput. Biol. Drug Des., 2017)

Predicting drug response of tumors from integrated genomic profiles by deep neural networks. - Yu-Chiao Chiu; Hung-I Harry Chen; Tinghe Zhang; Songyao Zhang; Aparna Gorthi; Li-Ju Wang; Yufei Huang 001; Yidong Chen 002 (CoRR, 2018)

Deep learning of pharmacogenomics resources: moving towards precision oncology. - Yu-Chiao Chiu; Hung-I Harry Chen; Aparna Gorthi; Milad Mostavi; Siyuan Zheng; Yufei Huang 001; Yidong Chen 002 (Briefings Bioinform., 2020)