Target-Independent Prediction of Drug Synergies Using Only Drug Lipophilicity. - Kaan Yilancioglu; Zohar B. Weinstein; Cem Meydan; Azat Akhmetov; Isil Toprak; Arda Durmaz; Ivan Iossifov; Hilal Kazan; Frederick P. Roth; Murat Cokol (J. Chem. Inf. Model., 2014)

Frequent Subgraph Mining of Personalized Signaling Pathway Networks Groups Patients with Frequently Dysregulated Disease Pathways and Predicts Prognosis. - Arda Durmaz; Tim A. D. Henderson; Douglas Brubaker; Gürkan Bebek (PSB, 2017)

Frequent Subgraph Mining of Functional Interaction Patterns Across Multiple Cancers. - Arda Durmaz; Tim A. D. Henderson; Gürkan Bebek (PSB, 2021)

DeepCellCount: Cell Counting Using Two-Step Deep Learning. - Sara Tesfamariam; Isah Abdullahi Lawal; Arda Durmaz; Jacob G. Scott (VISIGRAPP (2): VISAPP, 2025)