Low degree metabolites explain essential reactions and enhance modularity in biological networks. - Areejit Samal; Shalini Singh; Varun Giri; Sandeep Krishna; Nandula Raghuram; Sanjay Jain 005 (BMC Bioinform., 2006)

The regulatory network of E. coli metabolism as a Boolean dynamical system exhibits both homeostasis and flexibility of response. - Areejit Samal; Sanjay Jain 005 (BMC Syst. Biol., 2008)

Challenges in experimental data integration within genome-scale metabolic models. - Pierre-Yves Bourguignon; Areejit Samal; François Képès; Jürgen Jost; Olivier C. Martin (Algorithms Mol. Biol., 2010)

Genotype networks in metabolic reaction spaces. - Areejit Samal; João F. Matias Rodrigues; Jürgen Jost; Olivier C. Martin; Andreas Wagner (BMC Syst. Biol., 2010)

Environmental versatility promotes modularity in genome-scale metabolic networks. - Areejit Samal; Andreas Wagner; Olivier C. Martin (BMC Syst. Biol., 2011)

Advances in the integration of transcriptional regulatory information into genome-scale metabolic models. - R. P. Vivek-Ananth; Areejit Samal (Biosyst., 2016)

Relative stability of network states in Boolean network models of gene regulation in development. - Joseph Xu Zhou; Areejit Samal; Aymeric Fouquier d'Hérouël; Nathan D. Price 001; Sui Huang (Biosyst., 2016)

Comparative analysis of two discretizations of Ricci curvature for complex networks. - Areejit Samal; R. P. Sreejith; Jiao Gu; Shiping Liu; Emil Saucan; Jürgen Jost (CoRR, 2017)

A Simple Differential Geometry for Networks and Its Generalizations. - Emil Saucan; Areejit Samal; Jürgen Jost (COMPLEX NETWORKS (1), 2019)

Persistent homology of unweighted complex networks via discrete Morse theory. - Harish Kannan; Emil Saucan; Indrava Roy; Areejit Samal (CoRR, 2019)

Forman-Ricci curvature and Persistent homology of unweighted complex networks. - Indrava Roy; Sudharsan Vijayaraghavan; Sarath Jyotsna Ramaia; Areejit Samal (CoRR, 2019)

Degree difference: A simple measure to characterize structural heterogeneity in complex networks. - Amirhossein Farzam; Areejit Samal; Jürgen Jost (CoRR, 2020)

Edge-based analysis of networks: curvatures of graphs and hypergraphs. - Marzieh Eidi; Amirhossein Farzam; Wilmer Leal; Areejit Samal; Jürgen Jost (Theory Biosci., 2020)

A simple differential geometry for complex networks. - Emil Saucan; Areejit Samal; Jürgen Jost (Netw. Sci., 2021)

A Poset-Based Approach to Curvature of Hypergraphs. - Yasharth Yadav; Areejit Samal; Emil Saucan (Symmetry, 2022)

Leveraging developmental landscapes for model selection in Boolean gene regulatory networks. - Ajay Subbaroyan; Priyotosh Sil; Olivier C. Martin; Areejit Samal (Briefings Bioinform., 2023)

EPEK: Creation and analysis of an Ectopic Pregnancy Expression Knowledgebase. - Ananya Natarajan; Nikhil Chivukula; Gokul Balaji Dhanakoti; Ajaya Kumar Sahoo; Janani Ravichandran; Areejit Samal (Comput. Biol. Chem., 2023)

Biologically meaningful regulatory logic enhances the convergence rate in Boolean networks and bushiness of their state transition graph. - Priyotosh Sil; Ajay Subbaroyan; Saumitra Kulkarni; Olivier C. Martin; Areejit Samal (Briefings Bioinform., 2024)

Bakry-Émery-Ricci curvature: an alternative network geometry measure in the expanding toolbox of graph Ricci curvatures. - Madhumita Mondal; Areejit Samal; Florentin Münch; Jürgen Jost (J. Complex Networks, 2024)