ACLAME: A CLAssification of Mobile genetic Elements. - Raphaël Leplae; Aline Hebrant; Shoshana J. Wodak; Ariane Toussaint (Nucleic Acids Res., 2004)

Prophinder: a computational tool for prophage prediction in prokaryotic genomes. - Gipsi Lima-Mendez; Jacques van Helden; Ariane Toussaint; Raphaël Leplae (Bioinform., 2008)

ACLAME: A CLAssification of Mobile genetic Elements, update 2010. - Raphaël Leplae; Gipsi Lima-Mendez; Ariane Toussaint (Nucleic Acids Res., 2010)