Towards an Integrated Protein-Protein Interaction Network. - Ariel Jaimovich; Gal Elidan; Hanah Margalit; Nir Friedman (RECOMB, 2005)

Towards an Integrated Protein-Protein Interaction Network: A Relational Markov Network Approach. - Ariel Jaimovich; Gal Elidan; Hanah Margalit; Nir Friedman (J. Comput. Biol., 2006)

Template Based Inference in Symmetric Relational Markov Random Fields. - Ariel Jaimovich; Ofer Meshi; Nir Friedman (UAI, 2007)

Nucleosome positioning from tiling microarray data. - Moran Yassour; Tommy Kaplan; Ariel Jaimovich; Nir Friedman (ISMB, 2008)

Convexifying the Bethe Free Energy. - Ofer Meshi; Ariel Jaimovich; Amir Globerson; Nir Friedman (UAI, 2009)

Modularity and directionality in genetic interaction maps. - Ariel Jaimovich; Ruty Rinott; Maya Schuldiner; Hanah Margalit; Nir Friedman (Bioinform., 2010)

FastInf: An Efficient Approximate Inference Library. - Ariel Jaimovich; Ofer Meshi; Ian McGraw; Gal Elidan (J. Mach. Learn. Res., 2010)

Understanding protein-protein interaction networks (עם תקציר בעברית ושער נוסף: הבנת רשתות אינטראקציה בין חלבונים.). - Ariel Jaimovich (2010)