Structural proteomics of the poxvirus family. - Arlo Z. Randall; Pierre Baldi; Luis P. Villarreal (Artif. Intell. Medicine, 2004)

SCRATCH: a protein structure and structural feature prediction server. - Jianlin Cheng; Arlo Z. Randall; Michael J. Sweredoski; Pierre Baldi (Nucleic Acids Res., 2005)

From protein microarrays to diagnostic antigen discovery: a study of the pathogen Francisella tularensis. - Suman Sundaresh; Arlo Z. Randall; Berkay Unal; Jeannine M. Petersen; John T. Belisle; M. Gill Hartley; Melanie Duffield; Richard W. Titball; D. Huw Davies; Philip L. Felgner; Pierre Baldi (ISMB/ECCB (Supplement of Bioinformatics), 2007)

TMBpro: secondary structure, beta-contact and tertiary structure prediction of transmembrane beta-barrel proteins. - Arlo Z. Randall; Jianlin Cheng; Michael J. Sweredoski; Pierre Baldi (Bioinform., 2008)

SOLpro: accurate sequence-based prediction of protein solubility. - Christophe N. Magnan; Arlo Z. Randall; Pierre Baldi (Bioinform., 2009)

High-throughput prediction of protein antigenicity using protein microarray data. - Christophe N. Magnan; Michael Zeller; Matthew A. Kayala; Adam Vigil; Arlo Z. Randall; Philip L. Felgner; Pierre Baldi (Bioinform., 2010)

Data-Driven High-Throughput Prediction of the 3-D Structure of Small Molecules: Review and Progress. - Alessio Andronico; Arlo Z. Randall; Ryan W. Benz; Pierre Baldi (J. Chem. Inf. Model., 2011)

Incorporating post-translational modifications and unnatural amino acids into high-throughput modeling of protein structures. - Ken Nagata; Arlo Z. Randall; Pierre Baldi (Bioinform., 2014)