The Virtual Insect Brain protocol: creating and comparing standardized neuroanatomy. - Arnim Jenett; Johannes E. Schindelin; Martin Heisenberg (BMC Bioinform., 2006)

A Statistically Representative Atlas for Mapping Neuronal Circuits in the Drosophila Adult Brain. - Ignacio Arganda-Carreras; Tudor Manoliu; Nicolas Mazuras; Florian Schulze; Juan Eugenio Iglesias; Katja Bühler; Arnim Jenett; François Rouyer; Philippe Andrey (Frontiers Neuroinformatics, 2018)

Automated segmentation of thick confocal microscopy 3D images for the measurement of white matter volumes in zebrafish brains. - Sylvain Lempereur; Arnim Jenett; Elodie Machado; Ignacio Arganda-Carreras; Matthieu Simion; Pierre Affaticati; Jean-Stéphane Joly; Hugues Talbot (Math. Morphol. Theory Appl., 2020)