Optimal Parallel Evaluation of Tree-Structured Computations by Raking. - S. Rao Kosaraju; Arthur L. Delcher (AWOC, 1988)

Some Results on the Complexity of Exploiting Data Dependency in Parallel Logic Programs. - Arthur L. Delcher; Simon Kasif (J. Log. Program., 1989)

A Tree-Partitioning Technique with Applications to Expression Evaluation and Term Matching (Extended Abstract) - S. Rao Kosaraju; Arthur L. Delcher (FOCS, 1990)

Learning with a Helpful Teacher. - Steven Salzberg; Arthur L. Delcher; David G. Heath; Simon Kasif (IJCAI, 1991)

Improved Decision-Making in Game Trees: Recovering from Pathology. - Arthur L. Delcher; Simon Kasif (AAAI, 1992)

Efficient Parallel Term Matching and Anti-Unification. - Arthur L. Delcher; Simon Kasif (J. Autom. Reason., 1992)

Probabilistic Prediction of Protein Secondary Structure Using Causal Networks (Extended Abstract). - Arthur L. Delcher; Simon Kasif; Harry R. Goldberg; William H. Hsu (AAAI, 1993)

Protein Secondary-Structure Modeling with Probabilistic Networks. - Arthur L. Delcher; Simon Kasif; Harry R. Goldberg; William H. Hsu (ISMB, 1993)

Some Results on the Computational Complexity of Symmetric Connectionist Networks. - Simon Kasif; Saibal Banerjee; Arthur L. Delcher; Gregory F. Sullivan (Ann. Math. Artif. Intell., 1993)

Local Consistency in Parallel Constraint Satisfaction Networks. - Simon Kasif; Arthur L. Delcher (Artif. Intell., 1994)

Large-scale assembly of DNA strings and space-efficient construction of suffix trees. - S. Rao Kosaraju; Arthur L. Delcher (STOC, 1995)

Term Matching on a Mesh-Connected Array of Processors. - Arthur L. Delcher; Simon Kasif (Ann. Math. Artif. Intell., 1995)

Best-Case Results for Nearest-Neighbor Learning. - Steven Salzberg; Arthur L. Delcher; David G. Heath; Simon Kasif (IEEE Trans. Pattern Anal. Mach. Intell., 1995)

An NC Algorithm for Evaluating Monotone Planar Circuits. - Arthur L. Delcher; S. Rao Kosaraju (SIAM J. Comput., 1995)

Large-Scale Assembly of DNA Strings and Space-Efficient Construction of Suffix Trees (Correction). - S. Rao Kosaraju; Arthur L. Delcher (STOC, 1996)

Logarithmic-Time Updates and Queries in Probabilistic Networks. - Arthur L. Delcher; Adam J. Grove; Simon Kasif; Judea Pearl (J. Artif. Intell. Res., 1996)

A Decision Tree System for Finding Genes in DNA. - Steven Salzberg; Arthur L. Delcher; Kenneth H. Fasman; John C. Henderson (J. Comput. Biol., 1998)

Modeling splice sites with Bayes networks. - Deyou Cai; Arthur L. Delcher; Ben Kao; Simon Kasif (Bioinform., 2000)

Design of a compartmentalized shotgun assembler for the human genome. - Daniel H. Huson; Knut Reinert; Saul A. Kravitz; Karin A. Remington; Arthur L. Delcher; Ian M. Dew; Michael Flanigan; Aaron L. Halpern; Zhongwu Lai; Clark M. Mobarry; Granger G. Sutton; Eugene W. Myers (ISMB (Supplement of Bioinformatics), 2001)

PROBEmer: a web-based software tool for selecting optimal DNA oligos. - Scott J. Emrich; Mary Lowe; Arthur L. Delcher (Nucleic Acids Res., 2003)

Comparative genome assembly. - Mihai Pop; Adam M. Phillippy; Arthur L. Delcher; Steven Salzberg (Briefings Bioinform., 2004)

DAGchainer: a tool for mining segmental genome duplications and synteny. - Brian J. Haas; Arthur L. Delcher; Jennifer R. Wortman; Steven Salzberg (Bioinform., 2004)

A Preprocessor for Shotgun Assembly of Large Genomes. - Michael Roberts; Brian R. Hunt; James A. Yorke; Randall A. Bolanos; Arthur L. Delcher (J. Comput. Biol., 2004)

Efficient decoding algorithms for generalized hidden Markov model gene finders. - William H. Majoros; Mihaela Pertea; Arthur L. Delcher; Steven Salzberg (BMC Bioinform., 2005)

Identifying bacterial genes and endosymbiont DNA with Glimmer. - Arthur L. Delcher; Kirsten A. Bratke; Edwin C. Powers; Steven Salzberg (Bioinform., 2007)

High-throughput sequence alignment using Graphics Processing Units. - Michael C. Schatz; Cole Trapnell; Arthur L. Delcher; Amitabh Varshney (BMC Bioinform., 2007)

Minimus: a fast, lightweight genome assembler. - Daniel D. Sommer; Arthur L. Delcher; Steven L. Salzberg; Mihai Pop (BMC Bioinform., 2007)

Aggressive assembly of pyrosequencing reads with mates. - Jason R. Miller; Arthur L. Delcher; Sergey Koren; Eli Venter; Brian Walenz; Anushka Brownley; Justin Johnson 002; Kelvin Li; Clark M. Mobarry; Granger G. Sutton (Bioinform., 2008)

Hawkeye and AMOS: visualizing and assessing the quality of genome assemblies. - Michael C. Schatz; Adam M. Phillippy; Daniel D. Sommer; Arthur L. Delcher; Daniela Puiu; Giuseppe Narzisi; Steven L. Salzberg; Mihai Pop (Briefings Bioinform., 2013)

MUMmer4: A fast and versatile genome alignment system. - Guillaume Marçais; Arthur L. Delcher; Adam M. Phillippy; Rachel Coston; Steven L. Salzberg; Aleksey V. Zimin (PLoS Comput. Biol., 2018)