MOLS - A Program to Explore the Potential Energy Surface of a Peptide and Locate Its Low Energy Conformations. - Arun Prasad Pandurangan; Vengadesan Krishnan; Gautham Namasivayam (Silico Biol., 2005)

A new peptide docking strategy using a mean field technique with mutually orthogonal Latin square sampling. - Arun Prasad Pandurangan; Gautham Namasivayam (J. Comput. Aided Mol. Des., 2008)

Protein-Ligand Docking Using Mutually Orthogonal Latin Squares (MOLSDOCK). - S. Nehru Viji; Arun Prasad Pandurangan; Gautham Namasivayam (J. Chem. Inf. Model., 2009)

RIBFIND: a web server for identifying rigid bodies in protein structures and to aid flexible fitting into cryo EM maps. - Arun Prasad Pandurangan; Maya Topf (Bioinform., 2012)

SDM: a server for predicting effects of mutations on protein stability. - Arun Prasad Pandurangan; Bernardo Ochoa-Montaño; David B. Ascher; Tom L. Blundell (Nucleic Acids Res., 2017)

InterPro in 2019: improving coverage, classification and access to protein sequence annotations. - Alex L. Mitchell; Teresa K. Attwood; Patricia C. Babbitt; Matthias Blum; Peer Bork; Alan J. Bridge; Shoshana D. Brown; Hsin-Yu Chang; Sara El-Gebali; Matthew Fraser; Julian Gough; David Haft; et al. (Nucleic Acids Res., 2019)

The SUPERFAMILY 2.0 database: a significant proteome update and a new webserver. - Arun Prasad Pandurangan; Jonathan Stahlhacke; Matt E. Oates; Ben Smithers; Julian Gough (Nucleic Acids Res., 2019)

Genome3D: integrating a collaborative data pipeline to expand the depth and breadth of consensus protein structure annotation. - Ian Sillitoe; Antonina Andreeva; Tom L. Blundell; Daniel W. A. Buchan; Robert D. Finn; Julian Gough; David T. Jones; Lawrence A. Kelley; Typhaine Paysan-Lafosse; Su Datt Lam; Alexey G. Murzin; Arun Prasad Pandurangan; et al. (Nucleic Acids Res., 2020)

The InterPro protein families and domains database: 20 years on. - Matthias Blum; Hsin-Yu Chang; Sara Chuguransky; Tiago Grego; Swaathi Kandasamy; Alex L. Mitchell; Gift Nuka; Typhaine Paysan-Lafosse; Matloob Qureshi; Shriya Raj; Lorna J. Richardson; Gustavo A. Salazar; et al. (Nucleic Acids Res., 2021)

InterPro in 2022. - Typhaine Paysan-Lafosse; Matthias Blum; Sara Chuguransky; Tiago Grego; Beatriz Lázaro Pinto; Gustavo A. Salazar; Maxwell L. Bileschi; Peer Bork; Alan J. Bridge; Lucy J. Colwell; Julian Gough; Daniel H. Haft; et al. (Nucleic Acids Res., 2023)