It Takes Two To Tango: Modification of Siamese Long Short Term Memory Network with Attention Mechanism in Recognizing Argumentative Relations in Persuasive Essay. - Aryo Pradipta Gema; Suhendro Winton; Theodorus David; Derwin Suhartono; Muhsin Shodiq; Wikaria Gazali (ICCSCI, 2017)

Hierarchical Attention Network with XGBoost for Recognizing Insufficiently Supported Argument. - Derwin Suhartono; Aryo Pradipta Gema; Suhendro Winton; Theodorus David; Mohamad Ivan Fanany; Aniati Murni Arymurthy (MIWAI, 2017)

Attention-based argumentation mining. - Derwin Suhartono; Aryo Pradipta Gema; Suhendro Winton; Theodorus David; Mohamad Ivan Fanany; Aniati Murni Arymurthy (Int. J. Comput. Vis. Robotics, 2019)

Sequence-to-sequence Learning for motion-Aware Claim Generation. - Derwin Suhartono; Aryo Pradipta Gema; Suhendro Winton; Theodorus David; Mohamad Ivan Fanany; Aniati Murni Arymurthy (Int. J. Comput., 2020)

Argument annotation and analysis using deep learning with attention mechanism in Bahasa Indonesia. - Derwin Suhartono; Aryo Pradipta Gema; Suhendro Winton; Theodorus David; Mohamad Ivan Fanany; Aniati Murni Arymurthy (J. Big Data, 2020)

Vaxformer: Antigenicity-controlled Transformer for Vaccine Design Against SARS-CoV-2. - Aryo Pradipta Gema; Michal Kobiela; Achille Fraisse; Ajitha Rajan; Diego A. Oyarzún; Javier Antonio Alfaro (CoRR, 2023)

Knowledge Graph Embeddings in the Biomedical Domain: Are They Useful? A Look at Link Prediction, Rule Learning, and Downstream Polypharmacy Tasks. - Aryo Pradipta Gema; Dominik Grabarczyk; Wolf De Wulf; Piyush Borole; Javier Antonio Alfaro; Pasquale Minervini; Antonio Vergari; Ajitha Rajan (CoRR, 2023)

Parameter-Efficient Fine-Tuning of LLaMA for the Clinical Domain. - Aryo Pradipta Gema; Luke Daines; Pasquale Minervini; Beatrice Alex (CoRR, 2023)

pyComBat, a Python tool for batch effects correction in high-throughput molecular data using empirical Bayes methods. - Abdelkader Behdenna; Maximilien Colange; Julien Haziza; Aryo Gema; Guillaume Appé; Chloé-Agathe Azencott; Akpéli Nordor (BMC Bioinform., 2023)

Edinburgh Clinical NLP at MEDIQA-CORR 2024: Guiding Large Language Models with Hints. - Aryo Gema; Chaeeun Lee; Pasquale Minervini; Luke Daines; T. Ian Simpson; Beatrice Alex (ClinicalNLP@NAACL, 2024)

Parameter-Efficient Fine-Tuning of LLaMA for the Clinical Domain. - Aryo Gema; Pasquale Minervini; Luke Daines; Tom Hope; Beatrice Alex (ClinicalNLP@NAACL, 2024)

Edinburgh Clinical NLP at SemEval-2024 Task 2: Fine-tune your model unless you have access to GPT-4. - Aryo Gema; Giwon Hong; Pasquale Minervini; Luke Daines; Beatrice Alex (SemEval@NAACL, 2024)

The Hallucinations Leaderboard - An Open Effort to Measure Hallucinations in Large Language Models. - Giwon Hong; Aryo Pradipta Gema; Rohit Saxena; Xiaotang Du; Ping Nie; Yu Zhao 043; Laura Perez-Beltrachini; Max Ryabinin; Xuanli He; Clémentine Fourrier; Pasquale Minervini (CoRR, 2024)

A Comparative Study on Patient Language across Therapeutic Domains for Effective Patient Voice Classification in Online Health Discussions. - Giorgos Lysandrou; Roma English Owen; Vanja Popovic; Grant Le Brun; Aryo Pradipta Gema; Beatrice Alex; Elizabeth A. L. Fairley (CoRR, 2024)

CoMAT: Chain of Mathematically Annotated Thought Improves Mathematical Reasoning. - Joshua Ong Jun Leang; Aryo Pradipta Gema; Shay B. Cohen (CoRR, 2024)

Analysing the Residual Stream of Language Models Under Knowledge Conflicts. - Yu Zhao 043; Xiaotang Du; Giwon Hong; Aryo Pradipta Gema; Alessio Devoto; Hongru Wang 003; Xuanli He; Kam-Fai Wong; Pasquale Minervini (CoRR, 2024)

DeCoRe: Decoding by Contrasting Retrieval Heads to Mitigate Hallucinations. - Aryo Pradipta Gema; Chen Jin; Ahmed Abdulaal; Tom Diethe; Philip Teare; Beatrice Alex; Pasquale Minervini; Amrutha Saseendran (CoRR, 2024)

Fostering effective hybrid human-LLM reasoning and decision making. - Andrea Passerini; Aryo Gema; Pasquale Minervini; Burcu Sayin; Katya Tentori (Frontiers Artif. Intell., 2024)

Can GPT-3.5 generate and code discharge summaries? - Matús Falis; Aryo Pradipta Gema; Hang Dong 002; Luke Daines; Siddharth Basetti; Michael Holder; Rose S. Penfold; Alexandra Birch; Beatrice Alex (J. Am. Medical Informatics Assoc., 2024)

Balancing Act: Diversity and Consistency in Large Language Model Ensembles. - Ahmed Abdulaal; Chen Jin; Nina Montaña Brown; Aryo Pradipta Gema; Daniel C. Castro; Daniel C. Alexander; Philip Alexander Teare; Tom Diethe; Dino Oglic; Amrutha Saseendran (ICLR, 2025)

Are We Done with MMLU? - Aryo Pradipta Gema; Joshua Ong Jun Leang; Giwon Hong; Alessio Devoto; Alberto Carlo Maria Mancino; Rohit Saxena; Xuanli He; Yu Zhao 043; Xiaotang Du; Mohammad Reza Ghasemi Madani; Claire Barale; Robert McHardy; et al. (NAACL (Long Papers), 2025)

Self-Training Large Language Models for Tool-Use Without Demonstrations. - Ne Luo; Aryo Pradipta Gema; Xuanli He; Emile van Krieken; Pietro Lesci; Pasquale Minervini (NAACL (Findings), 2025)

Steering Knowledge Selection Behaviours in LLMs via SAE-Based Representation Engineering. - Yu Zhao 043; Alessio Devoto; Giwon Hong; Xiaotang Du; Aryo Pradipta Gema; Hongru Wang 003; Xuanli He; Kam-Fai Wong; Pasquale Minervini (NAACL (Long Papers), 2025)

Lost in Time: Clock and Calendar Understanding Challenges in Multimodal LLMs. - Rohit Saxena; Aryo Pradipta Gema; Pasquale Minervini (CoRR, 2025)

An Analysis of Decoding Methods for LLM-based Agents for Faithful Multi-Hop Question Answering. - Alexander Murphy; Mohd Sanad Zaki Rizvi; Aden Haussmann; Ping Nie; Guifu Liu; Aryo Pradipta Gema; Pasquale Minervini (CoRR, 2025)

Noiser: Bounded Input Perturbations for Attributing Large Language Models. - Mohammad Reza Ghasemi Madani; Aryo Pradipta Gema; Gabriele Sarti; Yu Zhao 043; Pasquale Minervini; Andrea Passerini (CoRR, 2025)

GRADA: Graph-based Reranker against Adversarial Documents Attack. - Jingjie Zheng; Aryo Pradipta Gema; Giwon Hong; Xuanli He; Pasquale Minervini; Youcheng Sun; Qiongkai Xu (CoRR, 2025)

Scalpel vs. Hammer: GRPO Amplifies Existing Capabilities, SFT Replaces Them. - Neel Rajani; Aryo Pradipta Gema; Seraphina Goldfarb-Tarrant; Ivan Titov (CoRR, 2025)

Inverse Scaling in Test-Time Compute. - Aryo Pradipta Gema; Alexander Hägele; Runjin Chen; Andy Arditi; Jacob Goldman-Wetzler; Kit Fraser-Taliente; Henry Sleight; Linda Petrini; Julian Michael; Beatrice Alex; Pasquale Minervini; Yanda Chen; et al. (CoRR, 2025)